Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.72□□□□□ -2.13
BRD4O60885 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.72□□□□□ -2.13
BRD4O60885 DUXAP1-201ENST00000556632 463 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.72□□□□□ -2.13
BRD4O60885 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.72□□□□□ -2.13
BRD4O60885 AC069431.2-201ENST00000604149 1099 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AL360085.1-201ENST00000604713 532 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AL158211.4-201ENST00000606988 584 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AC239868.4-201ENST00000608318 671 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AL603758.1-201ENST00000618654 241 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AC002550.2-201ENST00000621246 394 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AL445984.1-201ENST00000637834 659 ntBASIC1.72□□□□□ -2.13
BRD4O60885 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
BRD4O60885 MIR126-201ENST00000362291 85 ntBASIC1.72□□□□□ -2.13
BRD4O60885 RNU1-62P-201ENST00000362599 164 ntBASIC1.72□□□□□ -2.13
BRD4O60885 MIR222-201ENST00000384992 110 ntBASIC1.72□□□□□ -2.13
BRD4O60885 MIR620-201ENST00000385232 95 ntBASIC1.72□□□□□ -2.13
BRD4O60885 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
BRD4O60885 TPMTP3-201ENST00000411928 735 ntBASIC1.72□□□□□ -2.13
BRD4O60885 MTATP6P20-201ENST00000414147 562 ntBASIC1.72□□□□□ -2.13
BRD4O60885 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.72□□□□□ -2.13
BRD4O60885 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.72□□□□□ -2.13
BRD4O60885 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.72□□□□□ -2.13
BRD4O60885 MTATP6P14-201ENST00000455189 673 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AC117503.1-201ENST00000472241 394 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AC109445.1-201ENST00000512356 383 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AC093677.1-201ENST00000514414 678 ntBASIC1.72□□□□□ -2.13
BRD4O60885 DEFB131D-201ENST00000526803 184 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AC011712.1-201ENST00000588959 234 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AC016727.2-201ENST00000603988 621 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AL121895.2-201ENST00000619558 447 ntBASIC1.72□□□□□ -2.13
BRD4O60885 AC099842.1-201ENST00000619919 596 ntBASIC1.72□□□□□ -2.13
BRD4O60885 MTND4P9-201ENST00000507819 1346 ntBASIC1.71□□□□□ -2.14
BRD4O60885 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
BRD4O60885 RNU6-97P-201ENST00000363387 104 ntBASIC1.71□□□□□ -2.14
BRD4O60885 MIR561-201ENST00000385216 97 ntBASIC1.71□□□□□ -2.14
BRD4O60885 AC068050.1-201ENST00000394891 380 ntBASIC1.71□□□□□ -2.14
BRD4O60885 MTND5P25-201ENST00000430499 799 ntBASIC1.71□□□□□ -2.14
BRD4O60885 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.71□□□□□ -2.14
BRD4O60885 EEF1A1P39-201ENST00000440791 250 ntBASIC1.71□□□□□ -2.14
BRD4O60885 AC002381.1-201ENST00000447049 280 ntBASIC1.71□□□□□ -2.14
BRD4O60885 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.71□□□□□ -2.14
BRD4O60885 RNY4P37-201ENST00000516225 96 ntBASIC1.71□□□□□ -2.14
BRD4O60885 RNU6-150P-201ENST00000516237 95 ntBASIC1.71□□□□□ -2.14
BRD4O60885 RNU6-714P-201ENST00000516963 103 ntBASIC1.71□□□□□ -2.14
BRD4O60885 RNU6-840P-201ENST00000517275 65 ntBASIC1.71□□□□□ -2.14
BRD4O60885 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.71□□□□□ -2.14
BRD4O60885 OR6C7P-201ENST00000547875 934 ntBASIC1.71□□□□□ -2.14
BRD4O60885 AC006199.1-201ENST00000548728 219 ntBASIC1.71□□□□□ -2.14
BRD4O60885 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.71□□□□□ -2.14
BRD4O60885 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.71□□□□□ -2.14
BRD4O60885 MIR4509-3-201ENST00000578671 94 ntBASIC1.71□□□□□ -2.14
BRD4O60885 MIR4509-2-201ENST00000583920 94 ntBASIC1.71□□□□□ -2.14
BRD4O60885 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.71□□□□□ -2.14
BRD4O60885 AC083806.3-201ENST00000614016 455 ntBASIC1.71□□□□□ -2.14
BRD4O60885 MIR4509-1-201ENST00000618224 94 ntBASIC1.71□□□□□ -2.14
BRD4O60885 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.71□□□□□ -2.14
BRD4O60885 AL445264.1-201ENST00000621719 171 ntBASIC1.71□□□□□ -2.14
BRD4O60885 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
BRD4O60885 RNU6-1078P-201ENST00000364522 103 ntBASIC1.7□□□□□ -2.14
BRD4O60885 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
BRD4O60885 Y_RNA.465-201ENST00000384293 102 ntBASIC1.7□□□□□ -2.14
BRD4O60885 RPS3AP37-201ENST00000419176 745 ntBASIC1.7□□□□□ -2.14
BRD4O60885 AC015922.2-201ENST00000435593 184 ntBASIC1.7□□□□□ -2.14
BRD4O60885 MTND2P29-201ENST00000438595 412 ntBASIC1.7□□□□□ -2.14
BRD4O60885 MTND5P14-201ENST00000441481 1267 ntBASIC1.7□□□□□ -2.14
BRD4O60885 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.7□□□□□ -2.14
BRD4O60885 FCF1P6-201ENST00000456841 595 ntBASIC1.7□□□□□ -2.14
BRD4O60885 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.7□□□□□ -2.14
BRD4O60885 AC104563.1-201ENST00000476147 376 ntBASIC1.7□□□□□ -2.14
BRD4O60885 AC108729.1-201ENST00000487812 947 ntBASIC1.7□□□□□ -2.14
BRD4O60885 FAM206BP-201ENST00000510179 541 ntBASIC1.7□□□□□ -2.14
BRD4O60885 AC079395.1-201ENST00000510981 262 ntBASIC1.7□□□□□ -2.14
BRD4O60885 AC090821.2-201ENST00000523552 176 ntBASIC1.7□□□□□ -2.14
BRD4O60885 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.7□□□□□ -2.14
BRD4O60885 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.7□□□□□ -2.14
BRD4O60885 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.7□□□□□ -2.14
BRD4O60885 AC005261.5-201ENST00000596280 355 ntBASIC1.7□□□□□ -2.14
BRD4O60885 AC006270.3-201ENST00000605967 1036 ntBASIC1.7□□□□□ -2.14
BRD4O60885 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.7□□□□□ -2.14
BRD4O60885 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
BRD4O60885 Y_RNA.234-201ENST00000364409 97 ntBASIC1.69□□□□□ -2.14
BRD4O60885 Y_RNA.295-201ENST00000364918 102 ntBASIC1.69□□□□□ -2.14
BRD4O60885 RNU6-359P-201ENST00000365466 108 ntBASIC1.69□□□□□ -2.14
BRD4O60885 RNU6-1207P-201ENST00000384343 107 ntBASIC1.69□□□□□ -2.14
BRD4O60885 ERHP2-201ENST00000402323 299 ntBASIC1.69□□□□□ -2.14
BRD4O60885 CCNG1P1-201ENST00000406783 885 ntBASIC1.69□□□□□ -2.14
BRD4O60885 MIR1284-201ENST00000408337 120 ntBASIC1.69□□□□□ -2.14
BRD4O60885 MIR548J-201ENST00000408833 112 ntBASIC1.69□□□□□ -2.14
BRD4O60885 USP9YP33-201ENST00000412220 421 ntBASIC1.69□□□□□ -2.14
BRD4O60885 USP9YP11-201ENST00000427537 717 ntBASIC1.69□□□□□ -2.14
BRD4O60885 USP9YP35-201ENST00000435696 412 ntBASIC1.69□□□□□ -2.14
BRD4O60885 SNRPEP7-201ENST00000438350 220 ntBASIC1.69□□□□□ -2.14
BRD4O60885 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.69□□□□□ -2.14
BRD4O60885 EXOSC3P1-201ENST00000448649 500 ntBASIC1.69□□□□□ -2.14
BRD4O60885 AC007395.1-201ENST00000451333 677 ntBASIC1.69□□□□□ -2.14
BRD4O60885 MTND1P9-201ENST00000453775 944 ntBASIC1.69□□□□□ -2.14
BRD4O60885 AC005410.1-202ENST00000460347 485 ntBASIC1.69□□□□□ -2.14
BRD4O60885 AL160314.1-201ENST00000490836 438 ntBASIC1.69□□□□□ -2.14
BRD4O60885 AC116353.3-201ENST00000511215 249 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms