Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC003685.2-201ENST00000422795 395 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 RPL36AP53-201ENST00000432891 316 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CACNA1FO60840 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.79□□□□□ -1.96
CACNA1FO60840 RPS29P15-201ENST00000458329 171 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.79□□□□□ -1.96
CACNA1FO60840 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.79□□□□□ -1.96
CACNA1FO60840 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.79□□□□□ -1.96
CACNA1FO60840 OR4R1P-201ENST00000529879 463 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.79□□□□□ -1.96
CACNA1FO60840 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CACNA1FO60840 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.79□□□□□ -1.96
CACNA1FO60840 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.79□□□□□ -1.96
CACNA1FO60840 AL355375.2-201ENST00000574825 175 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 KC877982.1-201ENST00000602313 470 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 AC004853.1-201ENST00000604902 698 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 AC009248.2-201ENST00000619826 254 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.79□□□□□ -1.96
CACNA1FO60840 AL160413.1-201ENST00000622780 310 ntBASIC2.79□□□□□ -1.96
CACNA1FO60840 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.79□□□□□ -1.96
CACNA1FO60840 API5P2-201ENST00000397055 1498 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CACNA1FO60840 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.78□□□□□ -1.96
CACNA1FO60840 AC011460.1-201ENST00000636268 1834 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 RNU6-600P-201ENST00000362524 99 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 U8.2-201ENST00000363156 134 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 Y_RNA.263-201ENST00000364659 114 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 TXNP7-201ENST00000406296 293 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.78□□□□□ -1.96
CACNA1FO60840 MTCYBP8-201ENST00000422855 651 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.78□□□□□ -1.96
CACNA1FO60840 RPS15AP28-201ENST00000435088 386 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.78□□□□□ -1.96
CACNA1FO60840 RAC1P7-201ENST00000445367 377 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 AC021382.1-201ENST00000483523 359 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.78□□□□□ -1.96
CACNA1FO60840 SCARNA16.3-201ENST00000516595 184 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 AC022690.1-201ENST00000526681 550 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.78□□□□□ -1.96
CACNA1FO60840 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.78□□□□□ -1.96
CACNA1FO60840 MIR4795-201ENST00000584182 89 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 AC010525.2-201ENST00000590920 195 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 AL356585.4-201ENST00000623078 1229 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.78□□□□□ -1.96
CACNA1FO60840 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
CACNA1FO60840 ZNF680P1-201ENST00000436625 1469 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CACNA1FO60840 MTND4P35-201ENST00000604257 1375 ntBASIC2.78□□□□□ -1.96
CACNA1FO60840 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.78□□□□□ -1.97
CACNA1FO60840 Y_RNA.86-201ENST00000363020 111 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 U8.9-201ENST00000365667 134 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 RNU1-39P-201ENST00000383897 165 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 RNU6-606P-201ENST00000384721 111 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 RNU6-908P-201ENST00000410160 94 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 RN7SKP32-201ENST00000410167 303 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 RPL21P24-201ENST00000413752 448 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 AC099677.1-201ENST00000420575 175 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 AC007677.1-201ENST00000445757 515 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.78□□□□□ -1.97
CACNA1FO60840 snoU13.15-201ENST00000459407 104 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 AC091179.1-201ENST00000461606 579 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.78□□□□□ -1.97
CACNA1FO60840 AC016065.2-201ENST00000514530 444 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 RNU6-277P-201ENST00000516272 106 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 Y_RNA.675-201ENST00000516389 149 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 RNA5SP281-201ENST00000516504 135 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 RNU7-51P-201ENST00000516560 62 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 AP004371.1-201ENST00000525240 214 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 OR5B19P-201ENST00000531766 928 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 RPS3AP23-202ENST00000574601 686 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 MIR5002-201ENST00000584713 97 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 AL138880.2-201ENST00000616214 239 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 AL354950.2-201ENST00000617939 290 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.78□□□□□ -1.97
CACNA1FO60840 AL133216.2-202ENST00000634512 349 ntBASIC2.78□□□□□ -1.97
CACNA1FO60840 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.78□□□□□ -1.97
CACNA1FO60840 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.77□□□□□ -1.97
CACNA1FO60840 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CACNA1FO60840 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.77□□□□□ -1.97
CACNA1FO60840 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CACNA1FO60840 RNU6-1009P-201ENST00000390996 107 ntBASIC2.77□□□□□ -1.97
CACNA1FO60840 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.77□□□□□ -1.97
CACNA1FO60840 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.77□□□□□ -1.97
CACNA1FO60840 AL590233.1-201ENST00000430017 456 ntBASIC2.77□□□□□ -1.97
CACNA1FO60840 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.77□□□□□ -1.97
CACNA1FO60840 RPL39P40-201ENST00000445481 146 ntBASIC2.77□□□□□ -1.97
CACNA1FO60840 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.77□□□□□ -1.97
CACNA1FO60840 PPP1R2P5-201ENST00000457256 603 ntBASIC2.77□□□□□ -1.97
CACNA1FO60840 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.77□□□□□ -1.97
CACNA1FO60840 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.77□□□□□ -1.97
CACNA1FO60840 TBCAP3-201ENST00000512475 312 ntBASIC2.77□□□□□ -1.97
CACNA1FO60840 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.77□□□□□ -1.97
CACNA1FO60840 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.77□□□□□ -1.97
CACNA1FO60840 OR4P1P-201ENST00000530808 1136 ntBASIC2.77□□□□□ -1.97
CACNA1FO60840 AC087241.2-201ENST00000535801 324 ntBASIC2.77□□□□□ -1.97
CACNA1FO60840 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.77□□□□□ -1.97
CACNA1FO60840 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.77□□□□□ -1.97
CACNA1FO60840 SYF2P1-201ENST00000550658 413 ntBASIC2.77□□□□□ -1.97
CACNA1FO60840 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.77□□□□□ -1.97
CACNA1FO60840 AL391813.2-201ENST00000609113 322 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms