Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
SSNA1O43805 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SSNA1O43805 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 MIR517C-201ENST00000385103 95 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
SSNA1O43805 RNU6-278P-201ENST00000390945 109 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 SNORA40.18-201ENST00000391200 128 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 RNU2-41P-201ENST00000410991 178 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 USP9YP33-201ENST00000412220 421 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 USP9YP18-201ENST00000425912 695 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 USP9YP35-201ENST00000435696 412 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.18□□□□□ -2.22
SSNA1O43805 AC012308.1-201ENST00000451232 178 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 RNU6-953P-201ENST00000459154 107 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 AC099513.1-201ENST00000490423 301 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 AC104564.1-201ENST00000493028 407 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 AC021146.8-201ENST00000507455 733 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.18□□□□□ -2.22
SSNA1O43805 RN7SKP179-201ENST00000516126 217 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 RN7SKP256-201ENST00000517201 314 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.18□□□□□ -2.22
SSNA1O43805 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.18□□□□□ -2.22
SSNA1O43805 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.18□□□□□ -2.22
SSNA1O43805 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.18□□□□□ -2.22
SSNA1O43805 AC018630.3-201ENST00000542637 96 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 AL157871.3-201ENST00000557231 293 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.18□□□□□ -2.22
SSNA1O43805 BNIP3P26-201ENST00000600827 554 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 AC024060.1-201ENST00000607052 494 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 AC131235.4-201ENST00000609288 620 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 RMST_6.1-201ENST00000611980 203 ntBASIC1.18□□□□□ -2.22
SSNA1O43805 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SSNA1O43805 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SSNA1O43805 Y_RNA.99-201ENST00000363138 105 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 RNU6-1210P-201ENST00000363775 107 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 SNORA75B-201ENST00000384053 137 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 RNU1-78P-201ENST00000391248 165 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 AL513185.2-201ENST00000425543 193 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 AL354695.1-201ENST00000427935 228 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 AL035407.1-201ENST00000429211 571 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 AL591704.1-201ENST00000432574 275 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 MTCO3P5-201ENST00000433620 714 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 snoU13.9-201ENST00000458927 103 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 AC093259.1-201ENST00000509755 300 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 AC025465.3-201ENST00000510570 311 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 RNU6-991P-201ENST00000516168 107 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 RNU6-914P-201ENST00000516749 109 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 AC092325.1-201ENST00000566449 554 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 AC002400.1-201ENST00000569310 726 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SSNA1O43805 AC112220.2-201ENST00000605513 533 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.17□□□□□ -2.22
SSNA1O43805 AC124016.2-201ENST00000610058 665 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.17□□□□□ -2.22
SSNA1O43805 AC091834.1-201ENST00000614543 472 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 AL589994.2-201ENST00000621124 579 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 MIR7843-201ENST00000622274 79 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 MTND5P42-201ENST00000637720 498 ntBASIC1.17□□□□□ -2.22
SSNA1O43805 ZNF29P-201ENST00000225587 168 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SSNA1O43805 RNU6-942P-201ENST00000363002 107 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 RNU6-23P-201ENST00000363283 107 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 RNU6-487P-201ENST00000365430 104 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SSNA1O43805 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.16□□□□□ -2.22
SSNA1O43805 RNU6-622P-201ENST00000384272 103 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 MIR583-201ENST00000384846 75 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 CBX3P9-201ENST00000402326 552 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 MIR1323-201ENST00000408090 73 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 RN7SKP266-201ENST00000410232 287 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 NCOR1P3-201ENST00000420479 303 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 AL591212.2-201ENST00000433923 257 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 AL035666.1-201ENST00000446195 348 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 RPL23AP35-201ENST00000451906 501 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 AL583843.1-201ENST00000456070 346 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 AC112492.4-201ENST00000456549 352 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 DUXAP8-207ENST00000456786 622 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 AC132942.1-201ENST00000486753 483 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 HMGB1P30-201ENST00000492455 606 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.16□□□□□ -2.22
SSNA1O43805 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.16□□□□□ -2.22
SSNA1O43805 MTCYBP40-201ENST00000509390 1135 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.16□□□□□ -2.22
SSNA1O43805 RNU6-250P-201ENST00000516958 103 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.16□□□□□ -2.22
SSNA1O43805 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SSNA1O43805 AP000907.2-201ENST00000530827 353 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 AL356057.1-201ENST00000533798 831 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.16□□□□□ -2.22
SSNA1O43805 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.16□□□□□ -2.22
SSNA1O43805 AC078795.2-201ENST00000602835 1252 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 AC022893.3-201ENST00000607665 437 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 AC123767.1-202ENST00000620407 817 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.16□□□□□ -2.22
SSNA1O43805 AC110994.2-201ENST00000635481 492 ntBASIC1.16□□□□□ -2.22
SSNA1O43805 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SSNA1O43805 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
SSNA1O43805 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
SSNA1O43805 Y_RNA.33-201ENST00000362591 102 ntBASIC1.15□□□□□ -2.23
SSNA1O43805 SNORA63.3-201ENST00000362682 132 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms