Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 RNU6-529P-201ENST00000363383 104 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 SNORA25.8-201ENST00000364831 128 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.95□□□□□ -2.26
HMGB3O15347 RPS27P16-201ENST00000425758 201 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.95□□□□□ -2.26
HMGB3O15347 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.95□□□□□ -2.26
HMGB3O15347 ELOCP30-201ENST00000447108 299 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.95□□□□□ -2.26
HMGB3O15347 TPRKBP1-201ENST00000456243 481 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 AC087477.1-201ENST00000465747 340 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 AC004223.1-201ENST00000479840 271 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 SNORA26.10-201ENST00000516427 141 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 RNU6-572P-201ENST00000516724 80 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 RNU1-92P-201ENST00000517017 135 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 AP003122.4-201ENST00000530980 758 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.95□□□□□ -2.26
HMGB3O15347 AC012414.6-201ENST00000568241 401 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.95□□□□□ -2.26
HMGB3O15347 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.95□□□□□ -2.26
HMGB3O15347 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.95□□□□□ -2.26
HMGB3O15347 uc_338.15-201ENST00000615470 191 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.95□□□□□ -2.26
HMGB3O15347 SCARNA15.3-201ENST00000626315 122 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 SCARNA4.1-201ENST00000628597 123 ntBASIC0.95□□□□□ -2.26
HMGB3O15347 AP005901.5-201ENST00000545779 1796 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 RNU6-288P-201ENST00000363690 104 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 RNU4-91P-201ENST00000364778 135 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 SNORD1A-201ENST00000364968 72 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.94□□□□□ -2.26
HMGB3O15347 RPL37P10-201ENST00000412884 288 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 CYCSP49-201ENST00000420810 319 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 AC139712.2-201ENST00000424302 339 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 FO393414.1-201ENST00000428697 1184 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.94□□□□□ -2.26
HMGB3O15347 MTCO3P5-201ENST00000433620 714 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.94□□□□□ -2.26
HMGB3O15347 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.94□□□□□ -2.26
HMGB3O15347 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.94□□□□□ -2.26
HMGB3O15347 RN7SKP256-201ENST00000517201 314 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.94□□□□□ -2.26
HMGB3O15347 RAB11AP2-201ENST00000545905 639 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 AP001981.2-201ENST00000603241 418 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 HSPE1P19-201ENST00000603327 295 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 AC073413.2-201ENST00000604332 360 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 AC069545.1-201ENST00000605671 358 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 MIR6852-201ENST00000621699 66 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 AC009269.6-201ENST00000621778 588 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 AP000676.3-201ENST00000623299 569 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 AL356094.1-201ENST00000624663 1212 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.94□□□□□ -2.26
HMGB3O15347 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.94□□□□□ -2.26
HMGB3O15347 ZNF209P-201ENST00000593450 2304 ntBASIC0.94□□□□□ -2.26
HMGB3O15347 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.93□□□□□ -2.26
HMGB3O15347 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
HMGB3O15347 RNU6-744P-201ENST00000365557 107 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 SNORA70.7-201ENST00000384159 133 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 RNU6-1316P-201ENST00000384242 108 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 RNU6-14P-201ENST00000384630 106 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 OR6C66P-201ENST00000414917 930 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 HMGB1P27-201ENST00000431429 603 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC0.93□□□□□ -2.26
HMGB3O15347 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.93□□□□□ -2.26
HMGB3O15347 DYNLT3P2-201ENST00000442517 295 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 DUXAP8-207ENST00000456786 622 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.93□□□□□ -2.26
HMGB3O15347 UBE2DNL-203ENST00000474922 222 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.93□□□□□ -2.26
HMGB3O15347 MTCYBP40-201ENST00000509390 1135 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC0.93□□□□□ -2.26
HMGB3O15347 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.93□□□□□ -2.26
HMGB3O15347 TRAV32-201ENST00000553993 340 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 MIR5708-201ENST00000579723 85 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 AC012065.4-201ENST00000602445 679 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 AC093788.1-201ENST00000609356 927 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 AC023158.2-201ENST00000614876 543 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 AC093648.1-201ENST00000623546 606 ntBASIC0.93□□□□□ -2.26
HMGB3O15347 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.93□□□□□ -2.26
HMGB3O15347 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
HMGB3O15347 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HMGB3O15347 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
HMGB3O15347 RNU6-944P-201ENST00000364023 107 ntBASIC0.92□□□□□ -2.26
HMGB3O15347 AC119751.3-201ENST00000399720 670 ntBASIC0.92□□□□□ -2.26
HMGB3O15347 AC138623.1-201ENST00000418060 216 ntBASIC0.92□□□□□ -2.26
HMGB3O15347 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.92□□□□□ -2.26
HMGB3O15347 AL135790.2-201ENST00000437701 267 ntBASIC0.92□□□□□ -2.26
HMGB3O15347 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGB3O15347 AC005094.1-201ENST00000440420 368 ntBASIC0.92□□□□□ -2.26
HMGB3O15347 AC027119.1-201ENST00000440877 241 ntBASIC0.92□□□□□ -2.26
HMGB3O15347 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGB3O15347 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGB3O15347 FDX1P2-201ENST00000450769 375 ntBASIC0.92□□□□□ -2.26
HMGB3O15347 RNU6-775P-201ENST00000459318 96 ntBASIC0.92□□□□□ -2.26
HMGB3O15347 AC108729.1-201ENST00000487812 947 ntBASIC0.92□□□□□ -2.26
HMGB3O15347 RPL30P1-201ENST00000488676 339 ntBASIC0.92□□□□□ -2.26
HMGB3O15347 AC116337.1-201ENST00000509680 687 ntBASIC0.92□□□□□ -2.26
HMGB3O15347 AC093259.1-201ENST00000509755 300 ntBASIC0.92□□□□□ -2.26
HMGB3O15347 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.92□□□□□ -2.26
HMGB3O15347 AC079148.1-201ENST00000565944 819 ntBASIC0.92□□□□□ -2.26
HMGB3O15347 AC136618.2-201ENST00000575091 400 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms