Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 snoU109.1-201ENST00000459339 135 ntBASIC1.45□□□□□ -2.18
UPK2O00526 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.45□□□□□ -2.18
UPK2O00526 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK2O00526 AC116347.2-201ENST00000514912 523 ntBASIC1.45□□□□□ -2.18
UPK2O00526 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.45□□□□□ -2.18
UPK2O00526 AC105185.1-201ENST00000518705 535 ntBASIC1.45□□□□□ -2.18
UPK2O00526 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK2O00526 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.45□□□□□ -2.18
UPK2O00526 AP003392.2-201ENST00000527269 208 ntBASIC1.45□□□□□ -2.18
UPK2O00526 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK2O00526 AP000763.2-201ENST00000540641 163 ntBASIC1.45□□□□□ -2.18
UPK2O00526 IMMP1LP2-201ENST00000552954 492 ntBASIC1.45□□□□□ -2.18
UPK2O00526 AC024614.2-201ENST00000577584 372 ntBASIC1.45□□□□□ -2.18
UPK2O00526 MIR3618-201ENST00000580330 88 ntBASIC1.45□□□□□ -2.18
UPK2O00526 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.45□□□□□ -2.18
UPK2O00526 AF131215.7-201ENST00000602443 707 ntBASIC1.45□□□□□ -2.18
UPK2O00526 AC021646.1-201ENST00000605469 484 ntBASIC1.45□□□□□ -2.18
UPK2O00526 Z82243.1-201ENST00000609432 473 ntBASIC1.45□□□□□ -2.18
UPK2O00526 AC005296.1-201ENST00000616145 209 ntBASIC1.45□□□□□ -2.18
UPK2O00526 AC024940.5-201ENST00000622889 474 ntBASIC1.45□□□□□ -2.18
UPK2O00526 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.45□□□□□ -2.18
UPK2O00526 AL354685.2-201ENST00000448218 1447 ntBASIC1.45□□□□□ -2.18
UPK2O00526 AC008555.8-201ENST00000623602 2168 ntBASIC1.45□□□□□ -2.18
UPK2O00526 RNU6-529P-201ENST00000363383 104 ntBASIC1.44□□□□□ -2.18
UPK2O00526 Y_RNA.302-201ENST00000364997 102 ntBASIC1.44□□□□□ -2.18
UPK2O00526 RNU6-809P-201ENST00000384461 107 ntBASIC1.44□□□□□ -2.18
UPK2O00526 RNU6-1274P-201ENST00000384557 107 ntBASIC1.44□□□□□ -2.18
UPK2O00526 RNU6-253P-201ENST00000384730 105 ntBASIC1.44□□□□□ -2.18
UPK2O00526 RNU6-1176P-201ENST00000390955 107 ntBASIC1.44□□□□□ -2.18
UPK2O00526 AL356432.1-201ENST00000405809 419 ntBASIC1.44□□□□□ -2.18
UPK2O00526 MIR1262-201ENST00000408276 93 ntBASIC1.44□□□□□ -2.18
UPK2O00526 MIR1283-2-201ENST00000408621 87 ntBASIC1.44□□□□□ -2.18
UPK2O00526 RNU2-48P-201ENST00000410694 191 ntBASIC1.44□□□□□ -2.18
UPK2O00526 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK2O00526 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.44□□□□□ -2.18
UPK2O00526 MTCO2P21-201ENST00000419780 677 ntBASIC1.44□□□□□ -2.18
UPK2O00526 AL365338.1-201ENST00000422282 858 ntBASIC1.44□□□□□ -2.18
UPK2O00526 AL035407.1-201ENST00000429211 571 ntBASIC1.44□□□□□ -2.18
UPK2O00526 HMGN2P3-201ENST00000433603 273 ntBASIC1.44□□□□□ -2.18
UPK2O00526 HMGN2P5-201ENST00000436882 273 ntBASIC1.44□□□□□ -2.18
UPK2O00526 AL008629.1-201ENST00000438615 184 ntBASIC1.44□□□□□ -2.18
UPK2O00526 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.44□□□□□ -2.18
UPK2O00526 GDI2P2-201ENST00000445131 608 ntBASIC1.44□□□□□ -2.18
UPK2O00526 AC012308.1-201ENST00000451232 178 ntBASIC1.44□□□□□ -2.18
UPK2O00526 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.44□□□□□ -2.18
UPK2O00526 SSXP1-201ENST00000453640 473 ntBASIC1.44□□□□□ -2.18
UPK2O00526 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
UPK2O00526 AC010486.1-201ENST00000511793 424 ntBASIC1.44□□□□□ -2.18
UPK2O00526 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.44□□□□□ -2.18
UPK2O00526 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK2O00526 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.44□□□□□ -2.18
UPK2O00526 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.44□□□□□ -2.18
UPK2O00526 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.44□□□□□ -2.18
UPK2O00526 MIR4648-201ENST00000580107 72 ntBASIC1.44□□□□□ -2.18
UPK2O00526 SNRPGP17-201ENST00000603780 214 ntBASIC1.44□□□□□ -2.18
UPK2O00526 AC098614.4-201ENST00000607601 462 ntBASIC1.44□□□□□ -2.18
UPK2O00526 AC126118.1-201ENST00000607744 628 ntBASIC1.44□□□□□ -2.18
UPK2O00526 FRG1KP-201ENST00000623592 341 ntBASIC1.44□□□□□ -2.18
UPK2O00526 AC110994.2-201ENST00000635481 492 ntBASIC1.44□□□□□ -2.18
UPK2O00526 RNU5E-1-201ENST00000362477 120 ntBASIC1.43□□□□□ -2.18
UPK2O00526 RNU6-942P-201ENST00000363002 107 ntBASIC1.43□□□□□ -2.18
UPK2O00526 Y_RNA.97-201ENST00000363094 102 ntBASIC1.43□□□□□ -2.18
UPK2O00526 RNU6-931P-201ENST00000363850 107 ntBASIC1.43□□□□□ -2.18
UPK2O00526 RNU6-395P-201ENST00000365662 106 ntBASIC1.43□□□□□ -2.18
UPK2O00526 SNORA8-201ENST00000384574 139 ntBASIC1.43□□□□□ -2.18
UPK2O00526 MIR597-201ENST00000384968 97 ntBASIC1.43□□□□□ -2.18
UPK2O00526 RSL24D1P4-201ENST00000400938 484 ntBASIC1.43□□□□□ -2.18
UPK2O00526 RNU2-32P-201ENST00000411193 191 ntBASIC1.43□□□□□ -2.18
UPK2O00526 OR9R1P-201ENST00000412200 877 ntBASIC1.43□□□□□ -2.18
UPK2O00526 RPS15AP12-201ENST00000419498 388 ntBASIC1.43□□□□□ -2.18
UPK2O00526 RPL23AP30-201ENST00000432419 501 ntBASIC1.43□□□□□ -2.18
UPK2O00526 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK2O00526 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.43□□□□□ -2.18
UPK2O00526 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
UPK2O00526 FCF1P6-201ENST00000456841 595 ntBASIC1.43□□□□□ -2.18
UPK2O00526 RPL21P99-201ENST00000480369 423 ntBASIC1.43□□□□□ -2.18
UPK2O00526 ANXA2P1-201ENST00000505539 926 ntBASIC1.43□□□□□ -2.18
UPK2O00526 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
UPK2O00526 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK2O00526 AP005660.1-201ENST00000522972 293 ntBASIC1.43□□□□□ -2.18
UPK2O00526 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK2O00526 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK2O00526 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK2O00526 DEFB131E-202ENST00000602581 683 ntBASIC1.43□□□□□ -2.18
UPK2O00526 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.43□□□□□ -2.18
UPK2O00526 AC012360.2-201ENST00000609349 391 ntBASIC1.43□□□□□ -2.18
UPK2O00526 uc_338.15-201ENST00000615470 191 ntBASIC1.43□□□□□ -2.18
UPK2O00526 AC010608.3-201ENST00000625048 527 ntBASIC1.43□□□□□ -2.18
UPK2O00526 AL445984.1-201ENST00000637834 659 ntBASIC1.43□□□□□ -2.18
UPK2O00526 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
UPK2O00526 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
UPK2O00526 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.43□□□□□ -2.18
UPK2O00526 AP006437.1-201ENST00000641440 3685 ntBASIC1.42□□□□□ -2.18
UPK2O00526 Y_RNA.40-201ENST00000362645 93 ntBASIC1.42□□□□□ -2.18
UPK2O00526 RNU6-1010P-201ENST00000362757 107 ntBASIC1.42□□□□□ -2.18
UPK2O00526 RNU6-660P-201ENST00000364566 109 ntBASIC1.42□□□□□ -2.18
UPK2O00526 SNORD48-201ENST00000364953 64 ntBASIC1.42□□□□□ -2.18
UPK2O00526 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
UPK2O00526 RNU6-843P-201ENST00000384454 104 ntBASIC1.42□□□□□ -2.18
UPK2O00526 MIR620-201ENST00000385232 95 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms