Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.74□□□□□ -1.97
HMGB1P1B2RPK0 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGB1P1B2RPK0 SNORA31.11-201ENST00000516528 139 ntBASIC2.74□□□□□ -1.97
HMGB1P1B2RPK0 RNA5SP503-201ENST00000517047 117 ntBASIC2.74□□□□□ -1.97
HMGB1P1B2RPK0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGB1P1B2RPK0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.74□□□□□ -1.97
HMGB1P1B2RPK0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.74□□□□□ -1.97
HMGB1P1B2RPK0 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.74□□□□□ -1.97
HMGB1P1B2RPK0 SNRPGP17-201ENST00000603780 214 ntBASIC2.74□□□□□ -1.97
HMGB1P1B2RPK0 RNU6-6P-201ENST00000606623 107 ntBASIC2.74□□□□□ -1.97
HMGB1P1B2RPK0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
HMGB1P1B2RPK0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HMGB1P1B2RPK0 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 RNU6-1029P-201ENST00000384109 107 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 SNORA48.5-201ENST00000391143 135 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 AL445529.1-201ENST00000398713 389 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 CBX3P9-201ENST00000402326 552 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 RNU6ATAC-201ENST00000408749 126 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 BTF3L4P1-201ENST00000413813 468 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 AL807761.1-201ENST00000417622 171 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 AL139413.1-201ENST00000421309 217 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 IPO7P1-201ENST00000442031 636 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 NUTF2P7-201ENST00000453086 375 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 SNORD42A-201ENST00000459584 64 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 MTCYBP40-201ENST00000509390 1135 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 AC009812.2-201ENST00000517657 457 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 MIR4775-201ENST00000581168 75 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 MIR5092-201ENST00000583139 88 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 AL590229.1-201ENST00000603497 542 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 AC063944.3-201ENST00000609969 533 ntBASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.73□□□□□ -1.97
HMGB1P1B2RPK0 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 SNORA70.2-201ENST00000364506 135 ntBASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 RNU5A-2P-201ENST00000384337 116 ntBASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 MIR454-201ENST00000390180 115 ntBASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 RNU2-48P-201ENST00000410694 191 ntBASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 RNU7-182P-201ENST00000459009 62 ntBASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 MIR3913-1-201ENST00000577744 102 ntBASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 SEPT14P19-203ENST00000633205 211 ntBASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.72□□□□□ -1.97
HMGB1P1B2RPK0 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 SNORA63.1-201ENST00000362493 131 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 Y_RNA.324-201ENST00000365165 102 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 MIR937-201ENST00000401271 86 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 MIR1262-201ENST00000408276 93 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AC004975.1-201ENST00000428733 208 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 DNAJC19P4-201ENST00000440115 345 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 CACYBPP2-201ENST00000453625 678 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 RPS3P1-201ENST00000456781 192 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 PRELID3BP1-201ENST00000457142 540 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AC008885.1-201ENST00000514930 301 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 CKS1BP7-201ENST00000522230 235 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AP005660.1-201ENST00000522972 293 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AP001893.2-201ENST00000526949 202 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AC136624.4-201ENST00000573044 370 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 LRRC37A5P-203ENST00000580181 585 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AC078899.2-201ENST00000595282 212 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AC008749.1-201ENST00000597650 306 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AC245014.2-201ENST00000603689 287 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AC246785.4-201ENST00000605374 287 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AL137847.3-201ENST00000611521 109 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AC120349.3-201ENST00000624377 529 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 OR8B1P-202ENST00000641132 1178 ntBASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGB1P1B2RPK0 AC002543.1-201ENST00000299783 1954 ntBASIC2.7□□□□□ -1.98
HMGB1P1B2RPK0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGB1P1B2RPK0 U8.8-201ENST00000365399 135 ntBASIC2.7□□□□□ -1.98
HMGB1P1B2RPK0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HMGB1P1B2RPK0 BTF3P7-201ENST00000407097 488 ntBASIC2.7□□□□□ -1.98
HMGB1P1B2RPK0 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.7□□□□□ -1.98
HMGB1P1B2RPK0 Y_RNA.597-201ENST00000410463 100 ntBASIC2.7□□□□□ -1.98
HMGB1P1B2RPK0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HMGB1P1B2RPK0 AC007969.2-201ENST00000441891 191 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms