Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MIR659-201ENST00000384963 97 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 MIR10B-201ENST00000385011 110 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 SNORD66.1-201ENST00000391230 76 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 Y_RNA.626-201ENST00000411288 95 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 AC012671.1-201ENST00000451912 203 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 RPL26P26-201ENST00000480251 434 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 MRPL42P6-201ENST00000486397 371 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 AC016632.1-201ENST00000503994 196 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 AC024405.2-202ENST00000532731 184 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 AP001880.2-201ENST00000538233 448 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 MIR3910-1-201ENST00000580936 111 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 AC020895.1-201ENST00000595362 272 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 AC091905.4-201ENST00000623432 202 ntBASIC3.85□□□□□ -1.79
SHISA3A0PJX4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
SHISA3A0PJX4 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 AC073073.2-201ENST00000609827 2578 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 SNORA25.1-201ENST00000362326 128 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 RNU6-50P-201ENST00000362356 103 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 SNORA31-201ENST00000362607 130 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 SNORD56.1-201ENST00000362913 68 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 RNU6-774P-201ENST00000363238 107 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 RN7SKP103-201ENST00000363848 320 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 RNY4P28-201ENST00000365281 93 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 RNU6-159P-201ENST00000391080 106 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 RN7SKP61-201ENST00000410642 295 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 AP000873.1-201ENST00000463987 400 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 AC117440.1-201ENST00000474107 571 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 RNU7-110P-201ENST00000516891 62 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 AC005255.1-201ENST00000593748 216 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 AC024940.4-201ENST00000605507 246 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 MIR4727-201ENST00000622232 55 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 AC008785.1-201ENST00000624475 456 ntBASIC3.84□□□□□ -1.79
SHISA3A0PJX4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
SHISA3A0PJX4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SHISA3A0PJX4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SHISA3A0PJX4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SHISA3A0PJX4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SHISA3A0PJX4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.84□□□□□ -1.8
SHISA3A0PJX4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 AL133243.3-201ENST00000617415 3004 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 RNU6-600P-201ENST00000362524 99 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 RNU5F-3P-201ENST00000363767 117 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.286-201ENST00000364813 102 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 RNU1-140P-201ENST00000365040 165 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 RNU6-514P-201ENST00000384208 107 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 RNU6-281P-201ENST00000384212 103 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 Y_RNA.570-201ENST00000384750 101 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 AL732292.1-201ENST00000426692 226 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 AC006466.1-201ENST00000438721 289 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 RPL23AP93-201ENST00000440847 484 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 GPM6BP3-201ENST00000442797 145 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 RN7SL585P-201ENST00000470538 280 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 AC107393.1-201ENST00000512403 346 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 NACAP3-201ENST00000552100 481 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 MIR5695-201ENST00000579717 85 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.83□□□□□ -1.8
SHISA3A0PJX4 Mico1.1-201ENST00000611698 204 ntBASIC3.83□□□□□ -1.8
SHISA3A0PJX4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms