Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RPL30P11-203ENST00000598995 310 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU6-91P-201ENST00000607774 107 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 AL163051.2-201ENST00000618976 735 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 MIR8063-201ENST00000621930 81 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 AC068205.3-201ENST00000636385 468 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 MIR6767-201ENST00000637302 66 ntBASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
TRAV1-2A0A0B4J238 SNORD33-201ENST00000362761 85 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU6-414P-201ENST00000363705 104 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 SNORD114-27-201ENST00000363766 70 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 AL133475.1-201ENST00000404414 305 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU2-32P-201ENST00000411193 191 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 AC083875.1-201ENST00000419509 405 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 PIGFP2-201ENST00000421400 651 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 AC092473.1-201ENST00000441098 221 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 JTBP1-201ENST00000441314 247 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 PGBD4P5-201ENST00000445958 426 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 AL035666.1-201ENST00000446195 348 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 OR2AQ1P-201ENST00000451972 200 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 AC013828.1-201ENST00000481845 158 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 SCARNA16.2-201ENST00000516520 172 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 AC133794.1-201ENST00000602731 914 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 AC091946.2-201ENST00000606105 291 ntBASIC0.44□□□□□ -2.34
TRAV1-2A0A0B4J238 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU6-112P-201ENST00000363599 104 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU6-296P-201ENST00000384608 107 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 RPS27P22-201ENST00000478056 241 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AC145146.1-201ENST00000496370 254 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AC116655.1-201ENST00000508324 901 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU6-927P-201ENST00000516199 100 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AC109329.1-201ENST00000518744 317 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 DEFB108E-201ENST00000524692 240 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AP003392.2-201ENST00000527269 208 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 MIR4661-201ENST00000582720 75 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 BNIP3P10-201ENST00000605360 577 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AC034229.4-201ENST00000607861 441 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AL365204.3-201ENST00000612448 685 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AC009033.1-201ENST00000624279 431 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 AC099654.5-201ENST00000636479 350 ntBASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
TRAV1-2A0A0B4J238 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 RNU6-546P-201ENST00000383991 107 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 SNORA25-201ENST00000384384 134 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AC119751.3-201ENST00000399720 670 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 MTATP6P27-201ENST00000416987 621 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 Z82205.1-201ENST00000428456 297 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 C8orf59P1-201ENST00000429930 303 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 ZNF965P-201ENST00000432501 817 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 UBE2V1P8-201ENST00000437166 265 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 MTND1P18-201ENST00000448191 573 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 RPL30P1-201ENST00000488676 339 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AC010460.2-201ENST00000509054 677 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AC022616.8-201ENST00000533569 253 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AC011604.1-201ENST00000545978 196 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 RN7SL622P-201ENST00000585292 275 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AP003465.2-201ENST00000602571 373 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AL391646.1-201ENST00000603860 190 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AL139344.1-201ENST00000605228 195 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 BX284668.6-201ENST00000606899 438 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AC098614.4-201ENST00000607601 462 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 Z82243.1-201ENST00000609432 473 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AP001033.2-201ENST00000609701 1003 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 MIR6134-201ENST00000617606 109 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 MIR8065-201ENST00000620577 100 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 AC095038.3-201ENST00000634439 195 ntBASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
TRAV1-2A0A0B4J238 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 Y_RNA.99-201ENST00000363138 105 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 SNORA4.1-201ENST00000364263 144 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AL139397.2-201ENST00000404529 772 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AL161935.2-201ENST00000414627 60 ntBASIC0.41□□□□□ -2.34
TRAV1-2A0A0B4J238 AL669831.1-202ENST00000428504 417 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms