Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 AC245102.2-201ENST00000448956 180 ntBASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 RPL7P43-201ENST00000478876 753 ntBASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 HMGB1P28-201ENST00000507778 552 ntBASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 MTCYBP43-201ENST00000513621 740 ntBASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 AP003392.2-201ENST00000527269 208 ntBASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 CYP2C61P-201ENST00000604072 290 ntBASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 AC026741.1-201ENST00000605892 482 ntBASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 AL583856.2-201ENST00000606298 543 ntBASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 AC004908.3-201ENST00000610248 625 ntBASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
TRAV27A0A087WT01 OR5T3-201ENST00000303059 1023 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 CBX3P1-201ENST00000325243 554 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 AC138393.1-203ENST00000327086 343 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 RNU1-58P-201ENST00000362413 163 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 RNU6-188P-201ENST00000364207 107 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 RNU6-898P-201ENST00000365627 104 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 RNA5SP100-201ENST00000410903 110 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 RNA5SP59-201ENST00000410922 110 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 RNU2-32P-201ENST00000411193 191 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 MRPL35P3-201ENST00000421557 364 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 AL365400.1-201ENST00000431854 640 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 MTND2P20-201ENST00000440805 661 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 snoU13.9-201ENST00000458927 103 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 AC023194.1-201ENST00000493084 308 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 AC121161.1-201ENST00000510606 652 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 PTP4A1P4-201ENST00000512479 322 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 COPS8P3-201ENST00000526024 482 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 HIGD1AP17-201ENST00000554576 276 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 AL353997.4-201ENST00000586196 166 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 AL022345.1-201ENST00000607292 135 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 AC013470.4-201ENST00000619978 986 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 CDR1-202ENST00000625883 1485 ntBASIC0.86□□□□□ -2.27
TRAV27A0A087WT01 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 SNORA22-201ENST00000383907 134 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 SNORA22C-201ENST00000384614 134 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 RPL37P10-201ENST00000412884 288 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 MTCO1P3-201ENST00000429327 192 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 AL022238.1-201ENST00000442557 355 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 MTND2P30-201ENST00000456663 382 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 COX6CP14-201ENST00000469580 174 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 AC109927.2-201ENST00000506416 303 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 RNU6-583P-201ENST00000516012 92 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 RNVU1-2-201ENST00000516326 135 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 RNU5B-3P-201ENST00000516601 115 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 RN7SKP258-201ENST00000517151 304 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 AC023538.1-201ENST00000534576 736 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 RNU6-91P-201ENST00000607774 107 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 Z82243.1-201ENST00000609432 473 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 AC091895.1-201ENST00000624494 256 ntBASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
TRAV27A0A087WT01 HAUS6P2-201ENST00000433254 2404 ntBASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 Y_RNA.327-201ENST00000365201 102 ntBASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 RNU6-611P-201ENST00000384276 104 ntBASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 RNU6-1122P-201ENST00000384449 107 ntBASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 RNU6-1274P-201ENST00000384557 107 ntBASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 RPL21P24-201ENST00000413752 448 ntBASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 AC104651.1-201ENST00000427559 735 ntBASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 MTND4P6-201ENST00000438297 472 ntBASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 MTND1P31-201ENST00000449206 961 ntBASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 AC079776.3-201ENST00000450665 370 ntBASIC0.84□□□□□ -2.27
TRAV27A0A087WT01 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms