Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 RPS3AP25-201ENST00000411660 793 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 AL807761.1-201ENST00000417622 171 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 GTF2IP13-201ENST00000438487 386 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 FDX1P2-201ENST00000450769 375 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 RNU6-927P-201ENST00000516199 100 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 RNA5SP135-201ENST00000517019 125 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 RNU6-1183P-201ENST00000517054 60 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 MIR5094-201ENST00000578766 85 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 MIR3664-201ENST00000579074 99 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 MIR5195-201ENST00000583555 115 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 AL590095.2-201ENST00000604136 117 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 AL139344.1-201ENST00000605228 195 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 AC018926.1-201ENST00000616335 435 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 AC090617.9-201ENST00000623751 147 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 AC022513.1-201ENST00000624512 117 ntBASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 FTO-223ENST00000640179 210 ntTSL 5 BASIC0.24□□□□□ -2.37
LINC01558Q9Y6Z2 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 DBF4P1-201ENST00000412976 1892 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 GNG5P1-201ENST00000255500 204 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 RNU6-1167P-201ENST00000363227 94 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 SNORA5B-201ENST00000363786 132 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 RNU6-944P-201ENST00000364023 107 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 5S_rRNA.1-201ENST00000364415 116 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 RNU6-637P-201ENST00000384050 107 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 RNU6-110P-201ENST00000384508 104 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 MIR548B-201ENST00000385247 97 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC244023.1-201ENST00000426884 112 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 CETN4P-201ENST00000432407 469 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 TRBV12-1-201ENST00000479785 344 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC013828.1-201ENST00000481845 158 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 OR9N1P-202ENST00000494289 481 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 SNORA3.4-201ENST00000515969 96 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 RNA5SP168-201ENST00000516642 112 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 RN7SKP219-201ENST00000516825 296 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC018630.3-201ENST00000542637 96 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 NIFKP8-201ENST00000560500 874 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC022432.1-201ENST00000595739 310 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC242498.1-201ENST00000604134 111 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC243994.1-201ENST00000618627 109 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AL353770.2-201ENST00000620024 78 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC068831.8-201ENST00000620171 435 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 AC026634.1-201ENST00000634369 198 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 FARSBP1-201ENST00000435808 1778 ntBASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC0.23□□□□□ -2.37
LINC01558Q9Y6Z2 SNORA80A-201ENST00000363922 136 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 EBAG9P1-201ENST00000418955 543 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 RPS6P15-201ENST00000431996 751 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 GPM6BP2-201ENST00000432046 144 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 GPM6BP1-201ENST00000446387 144 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 RPS3AP22-201ENST00000488297 769 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 CAB39P1-201ENST00000502277 460 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 RNU6-991P-201ENST00000516168 107 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 HMGB1P33-201ENST00000563485 527 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 MIR3162-201ENST00000581818 82 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 MIR5010-201ENST00000582846 120 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 MIR3158-1-201ENST00000583596 81 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 VN1R82P-201ENST00000601481 356 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 AC130324.3-201ENST00000614165 542 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 uc_338.15-201ENST00000615470 191 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 MIR6835-201ENST00000621552 64 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 MIR6730-201ENST00000622213 67 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 AC034229.5-201ENST00000624258 185 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 AC006386.2-201ENST00000624491 75 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 AC012005.1-201ENST00000624575 75 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 AC099063.3-201ENST00000642066 185 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 AC134026.1-201ENST00000623249 2239 ntBASIC0.22□□□□□ -2.37
LINC01558Q9Y6Z2 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 Y_RNA.548-201ENST00000384656 105 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 MIR186-201ENST00000384988 86 ntBASIC0.21□□□□□ -2.38
LINC01558Q9Y6Z2 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms