Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 U6.114-201ENST00000636407 96 ntBASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 AC010889.1-201ENST00000566193 2666 ntBASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
SHROOM4Q9ULL8 Y_RNA.22-201ENST00000362492 102 ntBASIC4.5□□□□□ -1.69
SHROOM4Q9ULL8 MTATP6P16-201ENST00000434543 526 ntBASIC4.5□□□□□ -1.69
SHROOM4Q9ULL8 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.5□□□□□ -1.69
SHROOM4Q9ULL8 AC003071.1-201ENST00000451219 789 ntBASIC4.5□□□□□ -1.69
SHROOM4Q9ULL8 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM4Q9ULL8 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.5□□□□□ -1.69
SHROOM4Q9ULL8 MIR3913-1-201ENST00000577744 102 ntBASIC4.5□□□□□ -1.69
SHROOM4Q9ULL8 AC012409.4-201ENST00000612923 249 ntBASIC4.5□□□□□ -1.69
SHROOM4Q9ULL8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM4Q9ULL8 AC138915.1-201ENST00000565427 1685 ntBASIC4.5□□□□□ -1.69
SHROOM4Q9ULL8 MTND5P27-201ENST00000428871 1720 ntBASIC4.5□□□□□ -1.69
SHROOM4Q9ULL8 Y_RNA.33-201ENST00000362591 102 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 RNU6-181P-201ENST00000363225 107 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 RNU6-61P-201ENST00000365528 109 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 RNU6-395P-201ENST00000365662 106 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 CDK8P2-201ENST00000415020 547 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 AC023194.1-201ENST00000493084 308 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 RN7SKP298-201ENST00000515950 94 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 RNU6-445P-201ENST00000516949 107 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 AC012213.3-201ENST00000577199 777 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 MIR5007-201ENST00000583098 95 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 AL670379.4-201ENST00000605279 254 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 SNORA75-201ENST00000384158 137 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 RNU6-348P-201ENST00000384386 107 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 RNU6-456P-201ENST00000384493 107 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 RNU2-49P-201ENST00000410666 184 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 AC133104.1-201ENST00000429100 218 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 AC010493.1-201ENST00000513479 292 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 SNORD19.2-201ENST00000516978 73 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 RNU6-1183P-201ENST00000517054 60 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 MTCYBP20-201ENST00000524239 1129 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 AC005332.10-201ENST00000612725 619 ntBASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM4Q9ULL8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 RNU6-1042P-201ENST00000384204 107 ntBASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 AC007560.1-201ENST00000426912 237 ntBASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 AC132479.1-201ENST00000449160 144 ntBASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 AC117522.2-201ENST00000510049 657 ntBASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 RNU6-123P-201ENST00000516163 102 ntBASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 AP002963.1-201ENST00000530590 184 ntBASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 AC010546.1-201ENST00000569391 485 ntBASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 MIR5092-201ENST00000583139 88 ntBASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 AL121992.2-201ENST00000606262 256 ntBASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 AC126118.1-201ENST00000607744 628 ntBASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 MIR6733-201ENST00000635723 61 ntBASIC4.48□□□□□ -1.69
SHROOM4Q9ULL8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 GSTA9P-201ENST00000406231 611 ntBASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 MIR1287-201ENST00000408492 90 ntBASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 AC009969.1-201ENST00000438726 172 ntBASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 AL031667.1-201ENST00000440222 725 ntBASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 AC009296.1-201ENST00000443146 155 ntBASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 Z96811.1-201ENST00000445880 108 ntBASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 AC079140.3-201ENST00000511111 550 ntBASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 MRPS36P2-201ENST00000512569 299 ntBASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 MTCO3P28-201ENST00000513351 515 ntBASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 AC009902.1-201ENST00000519351 183 ntBASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 AC073648.5-201ENST00000603502 305 ntBASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 AC090617.7-201ENST00000623952 126 ntBASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 LRRC77P-213ENST00000637727 880 ntBASIC4.47□□□□□ -1.69
SHROOM4Q9ULL8 CISD1P1-201ENST00000393907 327 ntBASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 RPL23AP11-201ENST00000475260 469 ntBASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 AC022447.1-201ENST00000515358 464 ntBASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 OR4R1P-201ENST00000529879 463 ntBASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 GLYCAM1-201ENST00000546596 285 ntBASIC4.46□□□□□ -1.7
SHROOM4Q9ULL8 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms