Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AL391261.3-201ENST00000557194 520 ntBASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 AC021739.1-201ENST00000559631 174 ntBASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 AC008745.1-201ENST00000604064 271 ntBASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 AL591034.3-201ENST00000605511 685 ntBASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 AL121932.1-201ENST00000605542 214 ntBASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 AC004825.2-201ENST00000616634 455 ntBASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXD3Q9UJU5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 DHX9P1-201ENST00000436565 3076 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 AL133243.3-201ENST00000617415 3004 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 RNU1-35P-201ENST00000362782 153 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 Y_RNA.122-201ENST00000363331 96 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 Y_RNA.136-201ENST00000363444 102 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 RNU6-740P-201ENST00000364734 105 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 Y_RNA.292-201ENST00000364904 97 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 MIR195-201ENST00000385194 87 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 RPL36AP10-201ENST00000421785 322 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 CKS1BP6-201ENST00000424932 240 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 IGLV2-34-201ENST00000490007 283 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 SNORA40.9-201ENST00000515895 93 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 RNA5SP249-201ENST00000516127 99 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 RNU1-6P-201ENST00000516290 144 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 MIR4282-201ENST00000583613 67 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 FAM27B-201ENST00000610601 213 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 AL359198.2-201ENST00000611836 194 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 MIR6853-201ENST00000619642 74 ntBASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.28□□□□□ -1.72
FOXD3Q9UJU5 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
FOXD3Q9UJU5 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 AC126755.2-208ENST00000327792 462 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 AC138969.1-213ENST00000331436 462 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 MIR410-201ENST00000362222 80 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 RNA5SP191-201ENST00000362585 102 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.82-201ENST00000363000 102 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.92-201ENST00000363043 102 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.235-201ENST00000364412 102 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.306-201ENST00000365015 102 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.312-201ENST00000365089 102 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.322-201ENST00000365151 102 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 RNU6-1175P-201ENST00000365200 107 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 U3.30-201ENST00000391308 210 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 RPL23AP36-201ENST00000413895 458 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 AC099548.1-201ENST00000421443 426 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 AL645608.4-201ENST00000423619 154 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 EIF4HP2-201ENST00000424380 563 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 AC007395.1-201ENST00000451333 677 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.650-201ENST00000459002 102 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 RPS23P7-201ENST00000466210 444 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 SCARNA22-201ENST00000503991 125 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 AC107393.1-201ENST00000512403 346 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.777-201ENST00000516982 102 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 AC115990.1-201ENST00000526957 301 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 AC090897.2-201ENST00000581715 130 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.771-201ENST00000598668 102 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 AC072026.1-201ENST00000605023 201 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 Y_RNA.789-201ENST00000622480 102 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 AC008785.1-201ENST00000624475 456 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 ZFRP1-201ENST00000457579 2970 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 MFSD8-242ENST00000641690 4199 ntBASIC4.27□□□□□ -1.73
FOXD3Q9UJU5 TLK1P1-201ENST00000456760 2440 ntBASIC4.26□□□□□ -1.73
FOXD3Q9UJU5 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms