Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 MTCYBP11-201ENST00000447254 1109 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 RPL22P13-201ENST00000493291 347 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AC112198.4-201ENST00000515450 351 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 NRON-201ENST00000517270 370 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AC093510.2-201ENST00000562820 896 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 MIR4666A-201ENST00000580160 79 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AC005786.1-201ENST00000588553 154 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AL671309.1-201ENST00000603750 544 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AC004853.1-201ENST00000604902 698 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 AC005332.6-201ENST00000613178 446 ntBASIC1□□□□□ -2.25
PHRF1Q9P1Y6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 MIR126-201ENST00000362291 85 ntBASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 AL109755.1-201ENST00000401791 649 ntBASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 OFD1P3Y-201ENST00000453312 783 ntBASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 DUXAP8-207ENST00000456786 622 ntBASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-885P-201ENST00000516607 104 ntBASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 AC004812.1-201ENST00000540773 146 ntBASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 DUXAP1-201ENST00000556632 463 ntBASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 AC021739.1-201ENST00000559631 174 ntBASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 LINC00933-203ENST00000559812 219 ntBASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 OR4H6P-202ENST00000603819 340 ntBASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 AC024581.2-201ENST00000619986 252 ntBASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 MIR6835-201ENST00000621552 64 ntBASIC0.99□□□□□ -2.25
PHRF1Q9P1Y6 MIR508-201ENST00000384857 115 ntBASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 MIR95-201ENST00000385072 81 ntBASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 AC096920.1-201ENST00000423991 241 ntBASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 AC114878.1-201ENST00000441166 358 ntBASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 AL441985.1-201ENST00000457727 251 ntBASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 KLF3P2-201ENST00000465138 268 ntBASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 AC067942.3-201ENST00000512025 362 ntBASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 MIR4637-201ENST00000582405 84 ntBASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 AC004987.4-201ENST00000603383 338 ntBASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 AL031775.1-201ENST00000607014 887 ntBASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 AC009229.3-201ENST00000608056 282 ntBASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 AL596245.1-201ENST00000618994 362 ntBASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 AC004808.1-201ENST00000627671 721 ntBASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.98□□□□□ -2.25
PHRF1Q9P1Y6 NACAP2-201ENST00000318548 624 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-778P-201ENST00000363269 103 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RNA5SP499-201ENST00000363982 119 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-1300P-201ENST00000391046 108 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 MIR1197-201ENST00000408818 88 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RNU4-27P-201ENST00000410889 139 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AL160275.3-201ENST00000423876 471 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-351P-201ENST00000516097 100 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RNA5SP137-201ENST00000516833 135 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-1261P-201ENST00000517194 104 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AC036111.3-201ENST00000526389 112 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RRN3P3-201ENST00000549207 578 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AC090615.1-201ENST00000577519 154 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 MIR4299-201ENST00000577899 72 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AL589743.7-201ENST00000612637 233 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AL157770.1-201ENST00000623049 439 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AC019226.1-201ENST00000625666 515 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RNA5SP276-201ENST00000362580 94 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-353P-201ENST00000364266 108 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 SNORA23-201ENST00000365128 182 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-1235P-201ENST00000384559 107 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 MIR934-201ENST00000401241 83 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 MTCYBP38-201ENST00000417160 1123 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AL158823.1-201ENST00000418441 478 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 ELOCP14-201ENST00000428070 331 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 SNRPEP9-201ENST00000436794 238 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 ELOCP7-201ENST00000439968 331 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AC002381.1-201ENST00000447049 280 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RNU6-498P-201ENST00000459468 107 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RNU7-140P-201ENST00000459546 60 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AL049874.1-201ENST00000489560 388 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 SNORA31.6-201ENST00000516241 130 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 RNU5B-3P-201ENST00000516601 115 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 SNORA48.11-201ENST00000517015 89 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 CYCSP23-201ENST00000519781 313 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AP005639.2-201ENST00000527592 928 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 OR5AL2P-201ENST00000532185 920 ntBASIC0.97□□□□□ -2.25
PHRF1Q9P1Y6 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms