Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SNORA31.19-201ENST00000517079 126 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 AC009902.1-201ENST00000519351 183 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.73□□□□□ -2.13
TREX1Q9NSU2 ARL2BPP2-201ENST00000550907 489 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
TREX1Q9NSU2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.73□□□□□ -2.13
TREX1Q9NSU2 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.73□□□□□ -2.13
TREX1Q9NSU2 MIR4307-201ENST00000582802 84 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 BNIP3P40-201ENST00000596017 556 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 AP000860.1-201ENST00000605250 559 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 AC009974.1-201ENST00000608881 455 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 AL391813.2-201ENST00000609113 322 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 FRG1KP-201ENST00000623592 341 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 TEX21P-201ENST00000447107 1476 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 CDC27P3-201ENST00000635418 1910 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 AC092104.1-201ENST00000497346 1441 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.72□□□□□ -2.13
TREX1Q9NSU2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.72□□□□□ -2.13
TREX1Q9NSU2 Y_RNA.46-201ENST00000362695 102 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 RNU6-931P-201ENST00000363850 107 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
TREX1Q9NSU2 RNU6-83P-201ENST00000384568 112 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 MIR583-201ENST00000384846 75 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 SNORA40.18-201ENST00000391200 128 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 HMGN2P39-201ENST00000398005 273 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 RNU2-36P-201ENST00000410361 191 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AL358453.1-201ENST00000422522 250 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AL160275.3-201ENST00000423876 471 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AC096920.1-201ENST00000423991 241 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AL591212.2-201ENST00000433923 257 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AL139824.2-201ENST00000458731 1095 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 SNORD97-201ENST00000459187 142 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AC020699.1-201ENST00000505161 445 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AC116347.2-201ENST00000514912 523 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AC084851.1-201ENST00000529105 249 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AK6P1-201ENST00000540219 478 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.72□□□□□ -2.13
TREX1Q9NSU2 DEFB122-202ENST00000569013 197 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AC130324.3-201ENST00000614165 542 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AC006338.1-201ENST00000618453 749 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.72□□□□□ -2.13
TREX1Q9NSU2 MIR7843-201ENST00000622274 79 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AC091953.2-201ENST00000623979 160 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AC002543.1-201ENST00000299783 1954 ntBASIC1.72□□□□□ -2.13
TREX1Q9NSU2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.72□□□□□ -2.13
TREX1Q9NSU2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.71□□□□□ -2.13
TREX1Q9NSU2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
TREX1Q9NSU2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.71□□□□□ -2.14
TREX1Q9NSU2 AC138393.1-203ENST00000327086 343 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 RNA5SP432-201ENST00000362480 116 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 RNY4P24-201ENST00000362735 96 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 SNORA4.3-201ENST00000365564 137 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 SNORA40.19-201ENST00000390846 128 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TREX1Q9NSU2 RNU6-1025P-201ENST00000410629 104 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.71□□□□□ -2.14
TREX1Q9NSU2 MTND1P20-201ENST00000430341 950 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.71□□□□□ -2.14
TREX1Q9NSU2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.71□□□□□ -2.14
TREX1Q9NSU2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.71□□□□□ -2.14
TREX1Q9NSU2 MTND2P39-201ENST00000457230 764 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 PPP1R2P5-201ENST00000457256 603 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 FAM92A1P2-202ENST00000504766 877 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 MTND3P3-201ENST00000505004 126 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.71□□□□□ -2.14
TREX1Q9NSU2 RNU6-677P-201ENST00000516914 101 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 AP005639.2-201ENST00000527592 928 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.71□□□□□ -2.14
TREX1Q9NSU2 AC123904.2-201ENST00000548059 300 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 MIR4255-201ENST00000579351 72 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 MIR4524B-201ENST00000581569 115 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 AC022893.3-201ENST00000607665 437 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 AL391834.2-201ENST00000609982 546 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 AC084768.2-201ENST00000622736 221 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.71□□□□□ -2.14
TREX1Q9NSU2 MTND5P42-201ENST00000637720 498 ntBASIC1.71□□□□□ -2.14
TREX1Q9NSU2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.71□□□□□ -2.14
TREX1Q9NSU2 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.71□□□□□ -2.14
TREX1Q9NSU2 RNU6-858P-201ENST00000362436 107 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 SMIM11P1-201ENST00000369586 178 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
TREX1Q9NSU2 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TREX1Q9NSU2 RNU6-925P-201ENST00000384629 104 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AL353621.1-201ENST00000418219 243 ntBASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.7□□□□□ -2.14
TREX1Q9NSU2 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.7□□□□□ -2.14
TREX1Q9NSU2 AL161788.1-201ENST00000441805 169 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms