Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 KPNA2P1-201ENST00000458289 1591 ntBASIC2.15□□□□□ -2.07
TM9SF3Q9HD45 AC002543.1-201ENST00000299783 1954 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AL356292.1-201ENST00000283110 373 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AC005005.2-201ENST00000420779 380 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AL365184.2-201ENST00000431139 435 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 DNAJC19P4-201ENST00000440115 345 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 MTND4P25-201ENST00000441039 533 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 RPL23AP42-201ENST00000471152 471 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 RPL23AP41-201ENST00000484754 458 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AC022493.1-201ENST00000492984 337 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 MTND4P2-201ENST00000507767 1203 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 ACA59.2-201ENST00000517061 156 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AC107934.1-201ENST00000522215 217 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AC079598.5-201ENST00000547460 117 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 ARL2BPP2-201ENST00000550907 489 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AC009318.2-201ENST00000610917 651 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AL627230.6-201ENST00000611129 280 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AC008121.3-201ENST00000618726 433 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 AP000553.5-201ENST00000641933 54 ntBASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TM9SF3Q9HD45 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 CDC27P3-201ENST00000635418 1910 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 RNY3P13-201ENST00000365542 102 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 Y_RNA.560-201ENST00000384689 102 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 RNU2-36P-201ENST00000410361 191 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 RPS27AP14-201ENST00000422868 454 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 RPL37P21-201ENST00000435890 276 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 RNU6-953P-201ENST00000459154 107 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AC112771.1-201ENST00000463581 102 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AC004263.1-201ENST00000479327 332 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AC140059.1-201ENST00000489238 361 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 RPL38P4-201ENST00000502376 214 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 RNU6-991P-201ENST00000516168 107 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 RNU6-678P-201ENST00000516832 109 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AC025755.1-201ENST00000521306 278 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 MTND4LP18-201ENST00000526864 291 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 LRRC34P1-201ENST00000542742 915 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 PSMA3P-201ENST00000555485 635 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AC091489.2-201ENST00000566263 604 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AC009977.1-201ENST00000586015 570 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AC005034.5-201ENST00000604219 466 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AL121917.1-203ENST00000605534 577 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AC087045.1-201ENST00000605856 382 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 RNU6-91P-201ENST00000607774 107 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AL355816.2-201ENST00000610049 647 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AC006338.1-201ENST00000618453 749 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 AC093591.3-201ENST00000634516 308 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 MTND4P1-201ENST00000457501 1466 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 ZNF72P-201ENST00000425869 1908 ntBASIC2.13□□□□□ -2.07
TM9SF3Q9HD45 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 RNU6-500P-201ENST00000362349 107 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 RNU5E-1-201ENST00000362477 120 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 RNU6-288P-201ENST00000363690 104 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 RNU6-14P-201ENST00000384630 106 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 SNORA40.19-201ENST00000390846 128 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 RPL23AP39-201ENST00000415533 405 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 HMGN2P38-201ENST00000423806 265 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 MTCYBP39-201ENST00000437562 491 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 AL603825.1-201ENST00000438481 80 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 BTF3P15-201ENST00000455606 336 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 HMGN2P23-201ENST00000456759 269 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 RPL39P36-201ENST00000490784 156 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 MRPS17P9-201ENST00000511924 393 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 RNU6-548P-201ENST00000517083 115 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 AC109446.2-201ENST00000567872 497 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 MIR5697-201ENST00000578045 78 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 MIR3146-201ENST00000580367 79 ntBASIC2.12□□□□□ -2.07
TM9SF3Q9HD45 AC027807.2-201ENST00000616099 408 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms