Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.96□□□□□ -1.94
BRF2Q9HAW0 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
BRF2Q9HAW0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
BRF2Q9HAW0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 AC010329.5-201ENST00000623497 2174 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 AC026241.1-201ENST00000517873 2142 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 RNU6-858P-201ENST00000362436 107 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 RNU6-1303P-201ENST00000364841 107 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 RNU1-100P-201ENST00000365255 165 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 RNU6-38P-201ENST00000384085 107 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 MIR7-3-201ENST00000384898 110 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 RNU6-607P-201ENST00000411283 108 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 BX682237.1-201ENST00000415016 335 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 AC016831.2-201ENST00000417179 352 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 AL513043.1-201ENST00000439124 535 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 Z96811.1-201ENST00000445880 108 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 HIGD1AP2-201ENST00000446367 280 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 VN1R34P-201ENST00000447387 883 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 AC012308.1-201ENST00000451232 178 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 RNU6-333P-201ENST00000459117 107 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 RNU7-167P-201ENST00000459160 62 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 RN7SL75P-201ENST00000461926 281 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 TBCAP3-201ENST00000512475 312 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 AC114781.4-201ENST00000513707 639 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 RNA5SP385-201ENST00000515947 110 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 GLYCAM1-201ENST00000546596 285 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 MIR5680-201ENST00000577577 84 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 AC092747.3-201ENST00000603769 301 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 AP000907.4-201ENST00000604143 237 ntBASIC2.95□□□□□ -1.94
BRF2Q9HAW0 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
BRF2Q9HAW0 AC093831.2-201ENST00000624393 3427 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 Y_RNA.231-201ENST00000364358 102 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 RNA5SP72-201ENST00000364442 117 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 SNORA68.1-201ENST00000364537 132 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 Y_RNA.256-201ENST00000364594 104 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 RNU6-534P-201ENST00000364877 106 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 RNA5SP267-201ENST00000364893 126 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 Y_RNA.399-201ENST00000383955 105 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 RNU6-72P-201ENST00000384285 79 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 AL031121.1-201ENST00000406553 254 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 NDUFB4P5-201ENST00000415445 361 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 SNRPEP10-201ENST00000420249 274 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 AL365400.1-201ENST00000431854 640 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 AL139415.2-201ENST00000431968 163 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 CALM1P1-201ENST00000442082 433 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 RN7SL20P-201ENST00000488827 297 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 HIGD1AP13-201ENST00000509878 289 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 ACA59.2-201ENST00000517061 156 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 AC069113.1-201ENST00000517763 267 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 CENPUP1-201ENST00000526649 1202 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 AL138976.2-201ENST00000563989 694 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 MIR4444-1-201ENST00000581696 74 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 MIR4444-2-201ENST00000584390 74 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 MIR4506-201ENST00000584693 77 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 MIR4424-201ENST00000585257 86 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 AP000787.2-201ENST00000604432 568 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 ATP1B3P1-201ENST00000605365 821 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 MIR3662-201ENST00000637030 95 ntBASIC2.94□□□□□ -1.94
BRF2Q9HAW0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
BRF2Q9HAW0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms