Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 SUMO1P3-201ENST00000439961 304 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 AC108860.1-201ENST00000484521 383 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 RPS15AP34-201ENST00000487776 387 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 AC025445.1-201ENST00000502728 300 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 RNU4-60P-201ENST00000517239 135 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 TRAV32-201ENST00000553993 340 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 MIR1273C-201ENST00000578669 77 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 U3.45-201ENST00000607547 219 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 AL365434.2-201ENST00000607979 234 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 AC107294.1-201ENST00000609524 467 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 MIR7975-201ENST00000619350 68 ntBASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BCAS3Q9H6U6 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 AC116096.1-201ENST00000566804 2314 ntBASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 U8.8-201ENST00000365399 135 ntBASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 RNU6-356P-201ENST00000384140 107 ntBASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 PTMAP5-201ENST00000393073 333 ntBASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 NDUFB4P4-201ENST00000404822 243 ntBASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 RNU6-325P-201ENST00000411132 105 ntBASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 AL096701.2-201ENST00000416920 238 ntBASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 CKS1BP5-201ENST00000434172 273 ntBASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 AC008155.2-201ENST00000464337 397 ntBASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 AC022493.1-201ENST00000492984 337 ntBASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 MTND1P19-201ENST00000511780 315 ntBASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 RNU6-1315P-201ENST00000517187 99 ntBASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 AC109329.1-201ENST00000518744 317 ntBASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
BCAS3Q9H6U6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
BCAS3Q9H6U6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
BCAS3Q9H6U6 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 Y_RNA.14-201ENST00000362415 103 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 Y_RNA.222-201ENST00000364264 102 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 RNU4-50P-201ENST00000364361 141 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 Y_RNA.376-201ENST00000365638 108 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 Y_RNA.478-201ENST00000384358 107 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 MIR218-2-201ENST00000385006 110 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 MIR625-201ENST00000385047 85 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 MIR301A-201ENST00000385261 86 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 EIF4EP2-201ENST00000422816 654 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 CYCSP4-201ENST00000429682 331 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 MTCO3P8-201ENST00000453691 755 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 SNORA59A-201ENST00000459326 152 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 HSPE1P6-201ENST00000479457 291 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 AC025518.1-201ENST00000479856 347 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 AC074250.1-201ENST00000511117 192 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 GMPSP1-201ENST00000514075 579 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 RNU1-86P-201ENST00000516108 154 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 MIR892C-201ENST00000516410 77 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 RNU1-107P-201ENST00000516617 154 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 AC144568.1-201ENST00000520139 137 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 AL121603.1-201ENST00000553815 142 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 MIR5696-201ENST00000578474 85 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 MIR4273-201ENST00000582824 84 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 AC078899.3-201ENST00000599065 212 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 RAC1P9-201ENST00000604990 392 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 MTND4LP5-201ENST00000605152 292 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 AL121917.1-203ENST00000605534 577 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 AC008962.1-201ENST00000605729 304 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 AP000553.6-201ENST00000641242 118 ntBASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
BCAS3Q9H6U6 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 AL365440.1-201ENST00000436135 2167 ntBASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
BCAS3Q9H6U6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms