Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 OR5B19P-201ENST00000531766 928 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 AC092451.2-201ENST00000538746 658 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 AL512310.1-201ENST00000548639 172 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.22□□□□□ -2.21
VCX3BQ9H321 PSMA3P-201ENST00000555485 635 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 AC012213.3-201ENST00000577199 777 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.22□□□□□ -2.21
VCX3BQ9H321 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.22□□□□□ -2.21
VCX3BQ9H321 AL160281.1-201ENST00000605307 311 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 AL355802.3-201ENST00000607571 545 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 AC092574.1-201ENST00000609771 420 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 MIR6134-201ENST00000617606 109 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 AC138627.2-201ENST00000624202 601 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.22□□□□□ -2.21
VCX3BQ9H321 ZNF72P-201ENST00000425869 1908 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.21□□□□□ -2.22
VCX3BQ9H321 AL359704.1-201ENST00000411586 781 ntBASIC1.21□□□□□ -2.22
VCX3BQ9H321 AC127391.1-201ENST00000411737 98 ntBASIC1.21□□□□□ -2.22
VCX3BQ9H321 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.21□□□□□ -2.22
VCX3BQ9H321 RPS25P9-201ENST00000435591 252 ntBASIC1.21□□□□□ -2.22
VCX3BQ9H321 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.21□□□□□ -2.22
VCX3BQ9H321 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.21□□□□□ -2.22
VCX3BQ9H321 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.21□□□□□ -2.22
VCX3BQ9H321 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.21□□□□□ -2.22
VCX3BQ9H321 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.21□□□□□ -2.22
VCX3BQ9H321 RPF2P2-201ENST00000504693 896 ntBASIC1.21□□□□□ -2.22
VCX3BQ9H321 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.21□□□□□ -2.22
VCX3BQ9H321 AC108043.1-201ENST00000512696 574 ntBASIC1.21□□□□□ -2.22
VCX3BQ9H321 RNU6-667P-201ENST00000517186 102 ntBASIC1.21□□□□□ -2.22
VCX3BQ9H321 AP005660.1-201ENST00000522972 293 ntBASIC1.21□□□□□ -2.22
VCX3BQ9H321 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
VCX3BQ9H321 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.21□□□□□ -2.22
VCX3BQ9H321 AC005668.1-201ENST00000571142 476 ntBASIC1.21□□□□□ -2.22
VCX3BQ9H321 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.21□□□□□ -2.22
VCX3BQ9H321 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.21□□□□□ -2.22
VCX3BQ9H321 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.21□□□□□ -2.22
VCX3BQ9H321 RNU6-1284P-201ENST00000363701 100 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 RNU6-1257P-201ENST00000384625 110 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 RN7SKP266-201ENST00000410232 287 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 USP9YP33-201ENST00000412220 421 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 HMGB1P27-201ENST00000431429 603 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 BRK1P2-201ENST00000442875 223 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 RPS29P28-201ENST00000446439 141 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC112771.1-201ENST00000463581 102 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC023194.1-201ENST00000493084 308 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC109445.1-201ENST00000512356 383 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 CYCSP27-201ENST00000527643 293 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC009712.1-201ENST00000564938 316 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 AL606834.3-201ENST00000602615 496 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 BNIP3P19-201ENST00000605397 577 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 U6.99-201ENST00000637524 83 ntBASIC1.2□□□□□ -2.22
VCX3BQ9H321 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
VCX3BQ9H321 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.2□□□□□ -2.22
VCX3BQ9H321 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
VCX3BQ9H321 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.19□□□□□ -2.22
VCX3BQ9H321 TEX21P-201ENST00000447107 1476 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
VCX3BQ9H321 CBX3P1-201ENST00000325243 554 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 Y_RNA.333-201ENST00000365274 102 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 RNU6-413P-201ENST00000384115 107 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 MIR597-201ENST00000384968 97 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AL627390.1-201ENST00000396055 340 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AL133475.1-201ENST00000404414 305 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AL592045.1-201ENST00000429867 352 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.19□□□□□ -2.22
VCX3BQ9H321 RPS15AP9-201ENST00000439856 381 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AC007327.1-201ENST00000447461 264 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AC108729.1-201ENST00000487812 947 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.19□□□□□ -2.22
VCX3BQ9H321 AC104629.1-201ENST00000494226 508 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.19□□□□□ -2.22
VCX3BQ9H321 AC116655.1-201ENST00000508324 901 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VCX3BQ9H321 RNA5SP216-201ENST00000516111 123 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AC009902.1-201ENST00000519351 183 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AP006587.4-201ENST00000526053 529 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.19□□□□□ -2.22
VCX3BQ9H321 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.19□□□□□ -2.22
VCX3BQ9H321 BNIP3P33-201ENST00000598912 569 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AC107308.1-201ENST00000615897 301 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AL121890.5-201ENST00000620848 304 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 AL136313.1-201ENST00000624804 202 ntBASIC1.19□□□□□ -2.22
VCX3BQ9H321 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
VCX3BQ9H321 MIR208A-201ENST00000362287 71 ntBASIC1.18□□□□□ -2.22
VCX3BQ9H321 RNU6-1280P-201ENST00000365211 107 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms