Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 RNA5SP22-201ENST00000365393 109 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 RNU1-73P-201ENST00000383971 164 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AL390729.2-201ENST00000416137 156 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 WARS2P1-201ENST00000429678 537 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AL356535.1-201ENST00000440335 398 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 RN7SL738P-201ENST00000470264 297 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC022795.1-201ENST00000473808 480 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC008897.1-201ENST00000494006 347 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC027288.2-201ENST00000553028 243 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 BPIFA4P-203ENST00000603168 689 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC072026.1-201ENST00000605023 201 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 IGHVIII-44-202ENST00000636235 289 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC132825.6-201ENST00000638861 357 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-600P-201ENST00000362524 99 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 RNU1-63P-201ENST00000383902 164 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-217P-201ENST00000384164 104 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 RNU1-44P-201ENST00000384453 163 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 MIR141-201ENST00000384975 95 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 RNA5SP213-201ENST00000391031 106 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-1001P-201ENST00000411265 100 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 COX6B1P7-201ENST00000430845 235 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 NDUFB4P6-201ENST00000436819 366 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 GPM6BP3-201ENST00000442797 145 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 NUTF2P3-201ENST00000448540 384 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 AC009220.1-201ENST00000451614 275 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 Y_RNA.683-201ENST00000516508 93 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-1282P-201ENST00000516735 96 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 AC100770.1-201ENST00000532310 322 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 UBL5P4-201ENST00000562584 236 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 MIR4737-201ENST00000583979 81 ntBASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BHLHE41Q9C0J9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 AC006971.1-201ENST00000407916 4486 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-778P-201ENST00000363269 103 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 Y_RNA.122-201ENST00000363331 96 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-626P-201ENST00000363354 107 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 Y_RNA.275-201ENST00000364726 110 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 SNORD32A-201ENST00000364805 84 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 MIR10B-201ENST00000385011 110 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-1140P-201ENST00000410517 106 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 RNA5SP146-201ENST00000410743 123 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 RPL23AP95-201ENST00000426806 265 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 MTCO1P5-201ENST00000433573 344 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 TMSB4XP3-201ENST00000445144 114 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 AC125238.1-201ENST00000448842 249 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 HMGB3P8-201ENST00000449709 577 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 AC078918.1-201ENST00000498515 228 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 Vault.1-201ENST00000516474 102 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-567P-201ENST00000516746 107 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-1198P-201ENST00000516904 67 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 HSPE1P4-201ENST00000550617 308 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 MIR4423-201ENST00000580922 80 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 AL021997.2-201ENST00000615674 271 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 U2.21-201ENST00000637295 81 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms