Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RNU6-166P-201ENST00000384371 107 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 Y_RNA.530-201ENST00000384587 101 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 RNA5SP219-201ENST00000390940 113 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 EIF4E2P1-201ENST00000393781 255 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 SKA2P1-201ENST00000425592 390 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 CST9LP2-201ENST00000437612 320 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 MTND3P10-201ENST00000450967 341 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 BTF3P15-201ENST00000455606 336 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AL031183.1-201ENST00000457667 207 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 DYNLL1P5-201ENST00000467158 270 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AC011005.2-201ENST00000487324 359 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 RPS27AP10-201ENST00000496103 208 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AC116353.2-201ENST00000505332 712 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 CCDC34P1-201ENST00000507441 517 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AC113155.1-201ENST00000511141 769 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 RNA5SP367-201ENST00000516557 118 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 RNU6-1183P-201ENST00000517054 60 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AC090115.3-201ENST00000553218 849 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 MIR3945-201ENST00000581853 98 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AC073539.2-201ENST00000597113 165 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AC087045.1-201ENST00000605856 382 ntBASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
RTFDC1Q9BY42 AC008669.1-201ENST00000565823 2178 ntBASIC3.78□□□□□ -1.81
RTFDC1Q9BY42 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 MIR22-201ENST00000362190 85 ntBASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 SNORD14B-201ENST00000364533 90 ntBASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 RNU1-101P-201ENST00000391171 127 ntBASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 RPS4XP7-201ENST00000406274 780 ntBASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 AL513185.2-201ENST00000425543 193 ntBASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 MTCYBP18-201ENST00000501056 747 ntBASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 AC022634.1-201ENST00000520765 532 ntBASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 VN1R80P-201ENST00000597126 338 ntBASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 AC093913.1-201ENST00000614178 329 ntBASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 SCARNA4-202ENST00000625402 129 ntBASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 MIR3199-2-201ENST00000636243 86 ntBASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 AL365361.1-201ENST00000566942 3481 ntBASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.77□□□□□ -1.81
RTFDC1Q9BY42 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 MIR10A-201ENST00000385043 110 ntBASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 RNU6-332P-201ENST00000391193 108 ntBASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 BPY2DP-201ENST00000422208 265 ntBASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 AP000852.1-201ENST00000472460 573 ntBASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 AC009901.1-201ENST00000506703 541 ntBASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 MTND3P25-201ENST00000509243 135 ntBASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 AC025465.4-201ENST00000513422 638 ntBASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 RN7SKP132-201ENST00000516001 208 ntBASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 AC018638.8-201ENST00000588755 281 ntBASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 ADAM3A-203ENST00000461344 2157 ntBASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 CASC19-280ENST00000642102 1351 ntBASIC3.76□□□□□ -1.81
RTFDC1Q9BY42 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 AC110774.1-201ENST00000623567 2018 ntBASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 U3.12-201ENST00000364498 214 ntBASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 Y_RNA.378-201ENST00000365652 113 ntBASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 AP002088.1-201ENST00000382740 395 ntBASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 RNU6-876P-201ENST00000391295 104 ntBASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 AL356776.1-201ENST00000406574 447 ntBASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 USP9YP20-201ENST00000419224 558 ntBASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 AL590639.1-201ENST00000456484 337 ntBASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 AC069439.1-201ENST00000494739 167 ntBASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 AC018710.1-201ENST00000506509 158 ntBASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 SNORA19.2-201ENST00000516013 114 ntBASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 SNORA14.1-201ENST00000516113 141 ntBASIC3.75□□□□□ -1.81
RTFDC1Q9BY42 SCARNA20.6-201ENST00000517251 106 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms