Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 RNU6-47P-201ENST00000383866 107 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AL022722.2-201ENST00000402519 180 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 RPL19P1-201ENST00000411635 428 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AL139811.1-201ENST00000424779 2299 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AL627311.1-201ENST00000431514 115 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 CKS1BP5-201ENST00000434172 273 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 RPL23AP81-201ENST00000455252 467 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 U8.22-201ENST00000459141 133 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 RPS29P27-201ENST00000463711 170 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 RPL21P104-201ENST00000464143 478 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 RPL21P13-201ENST00000488305 481 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 RNU6-377P-201ENST00000515965 102 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 Y_RNA.679-201ENST00000516416 91 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 RNA5SP49-201ENST00000516450 115 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 RNU2-31P-201ENST00000516954 155 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 RN7SKP272-201ENST00000516988 232 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AC022559.1-201ENST00000520905 205 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AP003730.1-201ENST00000524605 285 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AC100770.1-201ENST00000532310 322 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AL121603.1-201ENST00000553815 142 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 RPL23AP97-201ENST00000568955 471 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AC009812.4-201ENST00000569134 1805 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 MTND6P33-201ENST00000571794 183 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AL161798.1-201ENST00000604630 131 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 FAM27D1-201ENST00000612308 341 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 MIR7154-201ENST00000620673 73 ntBASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SSBP3Q9BWW4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 AC016588.2-201ENST00000632484 3021 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 RNU1-14P-201ENST00000362759 152 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 SNORD14B-201ENST00000364533 90 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 RNU6-1035P-201ENST00000384477 107 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 Y_RNA.504-201ENST00000384481 104 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 MIR10A-201ENST00000385043 110 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 MIR34A-201ENST00000385130 110 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 Y_RNA.590-201ENST00000410140 107 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 MIR1911-201ENST00000410783 80 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 Y_RNA.623-201ENST00000411128 95 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 AL138785.1-201ENST00000425821 331 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 AL157831.1-201ENST00000426134 473 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 RPS6P12-201ENST00000432491 726 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 AC010469.1-201ENST00000463864 576 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 TOMM22P6-201ENST00000465035 409 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 RPS26P28-201ENST00000470806 348 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 RPS26P21-201ENST00000475397 348 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 CYCSP29-201ENST00000533731 318 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 AC005476.1-201ENST00000554427 397 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 AL078605.1-201ENST00000603529 500 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 SNORD113-5-201ENST00000607261 78 ntBASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
SSBP3Q9BWW4 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 RNU6-428P-201ENST00000362942 107 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 RNU4-9P-201ENST00000364951 139 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 RNA5SP22-201ENST00000365393 109 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 RNU6-1074P-201ENST00000383995 104 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 RNU6-1117P-201ENST00000384525 104 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 BTF3L4P2-201ENST00000392798 346 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 Z82188.1-201ENST00000436709 154 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 RPL23AP46-201ENST00000438548 490 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 AL359073.1-201ENST00000448036 403 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms