Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.59□□□□□ -2.15
VAT1Q99536 NDUFA5P6-201ENST00000542110 379 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.59□□□□□ -2.15
VAT1Q99536 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.59□□□□□ -2.15
VAT1Q99536 AC243960.4-201ENST00000600532 288 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 AC087045.1-201ENST00000605856 382 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 AC072039.2-201ENST00000608883 439 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 AL356596.1-201ENST00000624230 379 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 AC017037.3-201ENST00000625016 472 ntBASIC1.59□□□□□ -2.15
VAT1Q99536 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
VAT1Q99536 RNU6-723P-201ENST00000383973 107 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 FTH1P15-201ENST00000406984 280 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 FCF1P10-201ENST00000407590 479 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 PIGPP2-201ENST00000411569 458 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.58□□□□□ -2.16
VAT1Q99536 AL158823.1-201ENST00000418441 478 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 PGBD4P6-201ENST00000421501 610 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.58□□□□□ -2.16
VAT1Q99536 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.58□□□□□ -2.16
VAT1Q99536 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.58□□□□□ -2.16
VAT1Q99536 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.58□□□□□ -2.16
VAT1Q99536 AL121890.1-201ENST00000435457 205 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 TIMM9P1-201ENST00000436122 256 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 IFNA20P-201ENST00000436840 528 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 RPL23AP6-201ENST00000446637 472 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 RPL7P18-201ENST00000478965 734 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 RPS3AP22-201ENST00000488297 769 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.58□□□□□ -2.16
VAT1Q99536 AP005639.2-201ENST00000527592 928 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 OR5AL2P-201ENST00000532185 920 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.58□□□□□ -2.16
VAT1Q99536 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.58□□□□□ -2.16
VAT1Q99536 AC136618.2-201ENST00000575091 400 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 AC025811.1-201ENST00000604312 472 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.58□□□□□ -2.16
VAT1Q99536 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
VAT1Q99536 AC008121.3-201ENST00000618726 433 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.58□□□□□ -2.16
VAT1Q99536 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 AL512643.1-201ENST00000635735 524 ntBASIC1.58□□□□□ -2.16
VAT1Q99536 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.58□□□□□ -2.16
VAT1Q99536 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VAT1Q99536 RNU6-433P-201ENST00000363216 104 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 SNORA4.1-201ENST00000364263 144 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 SNORA4.3-201ENST00000365564 137 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.57□□□□□ -2.16
VAT1Q99536 Y_RNA.534-201ENST00000384599 112 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 SNORA40C-201ENST00000391285 128 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.57□□□□□ -2.16
VAT1Q99536 RPS20P15-201ENST00000412792 311 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.57□□□□□ -2.16
VAT1Q99536 RAC1P6-201ENST00000423911 575 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 USP9YP24-201ENST00000434374 697 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 AC010095.1-201ENST00000443543 144 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 KATNBL1P6-201ENST00000453433 915 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.57□□□□□ -2.16
VAT1Q99536 RNU6-953P-201ENST00000459154 107 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 MTND1P3-201ENST00000484956 952 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 YWHAEP4-201ENST00000505390 198 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.57□□□□□ -2.16
VAT1Q99536 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.57□□□□□ -2.16
VAT1Q99536 HSBP1P1-201ENST00000555205 166 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 ELOCP5-201ENST00000604924 333 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 AC080013.3-201ENST00000606839 578 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 AC106052.1-201ENST00000608029 497 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.57□□□□□ -2.16
VAT1Q99536 WWP1P1-201ENST00000466609 2769 ntBASIC1.57□□□□□ -2.16
VAT1Q99536 RNU6-166P-201ENST00000384371 107 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 MIR301A-201ENST00000385261 86 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 SNORA40.19-201ENST00000390846 128 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.56□□□□□ -2.16
VAT1Q99536 MIR1261-201ENST00000408659 82 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AC007098.1-201ENST00000420122 367 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 CYCSP49-201ENST00000420810 319 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AC008267.5-201ENST00000424928 265 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.56□□□□□ -2.16
VAT1Q99536 AL078601.1-201ENST00000444542 271 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.56□□□□□ -2.16
VAT1Q99536 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.56□□□□□ -2.16
VAT1Q99536 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.56□□□□□ -2.16
VAT1Q99536 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.56□□□□□ -2.16
VAT1Q99536 AC013828.2-201ENST00000532487 235 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AC022880.1-201ENST00000534017 973 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.56□□□□□ -2.16
VAT1Q99536 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.56□□□□□ -2.16
VAT1Q99536 AC136619.2-201ENST00000563361 631 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 DEFB122-202ENST00000569013 197 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AC026271.5-201ENST00000577873 130 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
VAT1Q99536 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
VAT1Q99536 RPL30P11-203ENST00000598995 310 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AL078605.1-201ENST00000603529 500 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AC069431.2-201ENST00000604149 1099 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 BNIP3P31-201ENST00000604515 566 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AC018638.7-201ENST00000605836 1114 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.56□□□□□ -2.16
VAT1Q99536 AC091965.5-201ENST00000624785 342 ntBASIC1.56□□□□□ -2.16
VAT1Q99536 AC004808.1-201ENST00000627671 721 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms