Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 RNU6-718P-201ENST00000516166 105 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 Y_RNA.689-201ENST00000516589 107 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 RNU6-677P-201ENST00000516914 101 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 SNORA31.26-201ENST00000517250 137 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.25□□□□□ -1.89
SIN3AQ96ST3 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.25□□□□□ -1.89
SIN3AQ96ST3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.25□□□□□ -1.89
SIN3AQ96ST3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.25□□□□□ -1.89
SIN3AQ96ST3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.25□□□□□ -1.89
SIN3AQ96ST3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.25□□□□□ -1.89
SIN3AQ96ST3 AL157687.1-201ENST00000554853 619 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 TRAV28-201ENST00000557548 323 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 AC027807.1-201ENST00000559921 996 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.25□□□□□ -1.89
SIN3AQ96ST3 AC025678.1-201ENST00000567861 338 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 MTATP6P3-201ENST00000581686 676 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 AC008521.1-201ENST00000587471 187 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.25□□□□□ -1.89
SIN3AQ96ST3 AL161798.1-201ENST00000604630 131 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 AC022893.3-201ENST00000607665 437 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 AC068944.2-201ENST00000610373 403 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 AC012409.4-201ENST00000612923 249 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 AL590808.1-201ENST00000618696 141 ntBASIC3.25□□□□□ -1.89
SIN3AQ96ST3 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.25□□□□□ -1.89
SIN3AQ96ST3 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.25□□□□□ -1.89
SIN3AQ96ST3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.25□□□□□ -1.89
SIN3AQ96ST3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.25□□□□□ -1.89
SIN3AQ96ST3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SIN3AQ96ST3 Y_RNA.9-201ENST00000362354 101 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 Y_RNA.256-201ENST00000364594 104 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 RNU6-1029P-201ENST00000384109 107 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 Y_RNA.481-201ENST00000384373 102 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SIN3AQ96ST3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 AC007064.1-201ENST00000412238 351 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.24□□□□□ -1.89
SIN3AQ96ST3 MTCO3P30-201ENST00000426425 670 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 HMGB1P27-201ENST00000431429 603 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.24□□□□□ -1.89
SIN3AQ96ST3 MTATP6P13-201ENST00000438531 667 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.24□□□□□ -1.89
SIN3AQ96ST3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.24□□□□□ -1.89
SIN3AQ96ST3 RNA5SP310-201ENST00000459084 116 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 RNU6-953P-201ENST00000459154 107 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 AC092436.1-201ENST00000506450 503 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.24□□□□□ -1.89
SIN3AQ96ST3 RN7SKP219-201ENST00000516825 296 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 RNU6-835P-201ENST00000516974 104 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.24□□□□□ -1.89
SIN3AQ96ST3 AP005435.4-201ENST00000529514 284 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 AC027309.3-201ENST00000623419 351 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 MIR3688-2-201ENST00000636963 87 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 MIR1321-201ENST00000637766 79 ntBASIC3.24□□□□□ -1.89
SIN3AQ96ST3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.24□□□□□ -1.89
SIN3AQ96ST3 AC103710.2-202ENST00000641454 2853 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 AL139276.1-201ENST00000311910 1001 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 RNY4P14-201ENST00000363656 96 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 RNU6-512P-201ENST00000364438 103 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 Y_RNA.534-201ENST00000384599 112 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 U3.37-201ENST00000408528 213 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 AL139413.1-201ENST00000421309 217 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.23□□□□□ -1.89
SIN3AQ96ST3 AL591212.2-201ENST00000433923 257 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.23□□□□□ -1.89
SIN3AQ96ST3 Z82210.1-201ENST00000440037 231 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.23□□□□□ -1.89
SIN3AQ96ST3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SIN3AQ96ST3 AL118520.1-201ENST00000450770 291 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 SSXP4-201ENST00000451349 245 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 FABP5P13-201ENST00000452144 328 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 GMFBP1-201ENST00000467831 427 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 RPL39P36-201ENST00000490784 156 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 AL160314.1-201ENST00000490836 438 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 RNU6-685P-201ENST00000517088 95 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 AC022690.1-201ENST00000526681 550 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.23□□□□□ -1.89
SIN3AQ96ST3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.23□□□□□ -1.89
SIN3AQ96ST3 BNIP3P30-201ENST00000601184 574 ntBASIC3.23□□□□□ -1.89
SIN3AQ96ST3 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.23□□□□□ -1.89
SIN3AQ96ST3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.23□□□□□ -1.89
SIN3AQ96ST3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIN3AQ96ST3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 RNU6-996P-201ENST00000365438 107 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 SNORA69-201ENST00000383895 132 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 Y_RNA.402-201ENST00000383972 102 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 RNU6-908P-201ENST00000410160 94 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 MTCYBP8-201ENST00000422855 651 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 AC092047.1-201ENST00000424997 240 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 ELOCP14-201ENST00000428070 331 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 ELOCP7-201ENST00000439968 331 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 MTND4P25-201ENST00000441039 533 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 AC073415.1-201ENST00000449240 153 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms