Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC087588.1-201ENST00000462203 316 ntBASIC0.05□□□□□ -2.4
CSMD1Q96PZ7 SCARNA16.2-201ENST00000516520 172 ntBASIC0.05□□□□□ -2.4
CSMD1Q96PZ7 AC008562.1-201ENST00000521763 330 ntBASIC0.05□□□□□ -2.4
CSMD1Q96PZ7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC0.05□□□□□ -2.4
CSMD1Q96PZ7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.05□□□□□ -2.4
CSMD1Q96PZ7 AC099654.5-201ENST00000636479 350 ntBASIC0.05□□□□□ -2.4
CSMD1Q96PZ7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 SNORA4.1-201ENST00000364263 144 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 SNORA68.1-201ENST00000364537 132 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 RPL31P3-201ENST00000458430 332 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 RNU6-1218P-201ENST00000458990 108 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 HMGB1P38-201ENST00000490557 577 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 AC008121.1-201ENST00000603244 268 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 AL713866.2-201ENST00000603579 219 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 MIR1295A-201ENST00000408463 79 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 RNA5SP222-201ENST00000411039 105 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 MTCO3P45-201ENST00000443036 613 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 PGBD4P5-201ENST00000445958 426 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 OR52A4P-202ENST00000481634 799 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 AP001025.1-201ENST00000486139 332 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 ACA64.5-201ENST00000516207 127 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 AP003122.4-201ENST00000530980 758 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 MTND2P13-201ENST00000577438 1039 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 MTND4P14-201ENST00000435799 1354 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 PTGES3P4-201ENST00000426243 356 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 RPS26P45-201ENST00000471748 340 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 RNU6-964P-201ENST00000516524 69 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 AL590282.1-201ENST00000610379 1136 ntBASIC0.04□□□□□ -2.4
CSMD1Q96PZ7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 COX6CP6-201ENST00000490840 228 ntBASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 MIR4764-201ENST00000580680 88 ntBASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 AL161629.2-201ENST00000615347 275 ntBASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 AC023934.1-201ENST00000574529 2389 ntBASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 AC048346.1-201ENST00000510247 144 ntBASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 SCARNA8-201ENST00000515924 131 ntBASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 AP003400.5-201ENST00000624827 617 ntBASIC0.03□□□□□ -2.4
CSMD1Q96PZ7 AL359704.1-201ENST00000411586 781 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 AL590556.1-201ENST00000423231 483 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 AL162730.1-201ENST00000605734 292 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 AC020923.1-201ENST00000624021 917 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 U3.13-201ENST00000364804 214 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 SNORA25-201ENST00000384384 134 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 RPL31P20-201ENST00000449593 360 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 HMGB1P36-201ENST00000487709 576 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 AC147055.4-201ENST00000504399 745 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 AC105224.1-201ENST00000587055 421 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 MIR8064-201ENST00000612863 90 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 OR5AK4P-201ENST00000635912 903 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 FARSBP1-201ENST00000435808 1778 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 SNORD18A-201ENST00000363753 72 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 AC093677.1-201ENST00000514414 678 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 AC100812.1-201ENST00000607622 580 ntBASIC0.02□□□□□ -2.41
CSMD1Q96PZ7 RNU4-48P-201ENST00000365559 182 ntBASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 AC069114.2-201ENST00000604699 304 ntBASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 AC106900.2-201ENST00000604994 317 ntBASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 SNORA32.3-201ENST00000384772 121 ntBASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 HSPE1P9-201ENST00000440046 311 ntBASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 AL512506.2-201ENST00000624472 458 ntBASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 AC093106.2-201ENST00000428212 385 ntBASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 AC244505.3-201ENST00000454598 187 ntBASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 AL590229.1-201ENST00000603497 542 ntBASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 TPTE2P4-201ENST00000258589 1605 ntBASIC0.01□□□□□ -2.41
CSMD1Q96PZ7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
CSMD1Q96PZ7 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
CSMD1Q96PZ7 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
CSMD1Q96PZ7 RNU6-152P-201ENST00000384037 107 ntBASIC0□□□□□ -2.41
CSMD1Q96PZ7 Y_RNA.493-201ENST00000384422 102 ntBASIC0□□□□□ -2.41
CSMD1Q96PZ7 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0□□□□□ -2.41
CSMD1Q96PZ7 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms