Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 AC104576.1-201ENST00000524225 88 ntBASIC2.69□□□□□ -1.98
DUX3Q96PT4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.69□□□□□ -1.98
DUX3Q96PT4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.69□□□□□ -1.98
DUX3Q96PT4 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.69□□□□□ -1.98
DUX3Q96PT4 AL442663.2-201ENST00000554385 511 ntBASIC2.69□□□□□ -1.98
DUX3Q96PT4 AL355836.1-201ENST00000555951 870 ntBASIC2.69□□□□□ -1.98
DUX3Q96PT4 MED28P6-201ENST00000558776 231 ntBASIC2.69□□□□□ -1.98
DUX3Q96PT4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.69□□□□□ -1.98
DUX3Q96PT4 AC007151.1-201ENST00000572774 483 ntBASIC2.69□□□□□ -1.98
DUX3Q96PT4 BDH2P1-201ENST00000602288 736 ntBASIC2.69□□□□□ -1.98
DUX3Q96PT4 AP001836.1-201ENST00000604675 523 ntBASIC2.69□□□□□ -1.98
DUX3Q96PT4 AP003355.3-201ENST00000623465 114 ntBASIC2.69□□□□□ -1.98
DUX3Q96PT4 AC092608.2-201ENST00000624427 218 ntBASIC2.69□□□□□ -1.98
DUX3Q96PT4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
DUX3Q96PT4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
DUX3Q96PT4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
DUX3Q96PT4 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC2.69□□□□□ -1.98
DUX3Q96PT4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC2.69□□□□□ -1.98
DUX3Q96PT4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
DUX3Q96PT4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
DUX3Q96PT4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
DUX3Q96PT4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
DUX3Q96PT4 MTND5P27-201ENST00000428871 1720 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
DUX3Q96PT4 AC093010.3-201ENST00000570269 15214 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 RNU6-562P-201ENST00000362731 107 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 Y_RNA.146-201ENST00000363549 102 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 RNA5SP267-201ENST00000364893 126 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 DYNLT3P1-201ENST00000378574 347 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 Y_RNA.399-201ENST00000383955 105 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 RNU6-434P-201ENST00000384376 107 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 MIR514A1-201ENST00000385133 98 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 RNU6-1077P-201ENST00000410506 102 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 CYCSP33-201ENST00000414485 327 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 RPS24P13-201ENST00000442520 397 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 MTND4P19-201ENST00000446659 478 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 RNU7-152P-201ENST00000458982 64 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 AC084357.1-201ENST00000473404 255 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 AC022493.1-201ENST00000492984 337 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 RNU1-86P-201ENST00000516108 154 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 RNU1-107P-201ENST00000516617 154 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 AC098826.3-201ENST00000603823 466 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 NUTF2P8-201ENST00000604593 363 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 AC016925.2-201ENST00000605108 242 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 RNVU1-4-201ENST00000612985 164 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 SNORD39.4-201ENST00000620099 78 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 AC022418.1-201ENST00000624118 445 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 AL669831.3-213ENST00000636676 183 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 MTND5P19-201ENST00000424872 1794 ntBASIC2.68□□□□□ -1.98
DUX3Q96PT4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
DUX3Q96PT4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
DUX3Q96PT4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.68□□□□□ -1.98
DUX3Q96PT4 AC058791.1-201ENST00000608412 3198 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
DUX3Q96PT4 AC073346.2-201ENST00000624724 2058 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
DUX3Q96PT4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.67□□□□□ -1.98
DUX3Q96PT4 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
DUX3Q96PT4 RNA5SP197-201ENST00000363357 119 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 Y_RNA.187-201ENST00000363918 113 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 Y_RNA.197-201ENST00000364004 102 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 RNU6-266P-201ENST00000364225 107 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 RNU1-33P-201ENST00000364249 162 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 SNORA33.2-201ENST00000365413 134 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 RNU6-574P-201ENST00000384265 107 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 AL391417.1-201ENST00000404100 426 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.67□□□□□ -1.98
DUX3Q96PT4 AL158156.1-201ENST00000422509 473 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.67□□□□□ -1.98
DUX3Q96PT4 AC005300.1-201ENST00000428401 373 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 HMGB1P9-201ENST00000429856 646 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 RPL23AP69-201ENST00000431134 458 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.67□□□□□ -1.98
DUX3Q96PT4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.67□□□□□ -1.98
DUX3Q96PT4 RNU7-187P-201ENST00000458985 68 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 AC130509.1-201ENST00000464158 433 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.67□□□□□ -1.98
DUX3Q96PT4 AC139453.3-201ENST00000493276 369 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.67□□□□□ -1.98
DUX3Q96PT4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.67□□□□□ -1.98
DUX3Q96PT4 MTCYBP40-201ENST00000509390 1135 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.67□□□□□ -1.98
DUX3Q96PT4 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.67□□□□□ -1.98
DUX3Q96PT4 RNU2-27P-201ENST00000516185 142 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 RNU6-1256P-201ENST00000516539 103 ntBASIC2.67□□□□□ -1.98
DUX3Q96PT4 RNA5SP384-201ENST00000516615 116 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms