Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC115Q96NT0 Y_RNA.638-201ENST00000459374 113 ntBASIC0.91□□□□□ -2.26
CCDC115Q96NT0 RPS26P55-201ENST00000471178 356 ntBASIC0.91□□□□□ -2.26
CCDC115Q96NT0 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.91□□□□□ -2.26
CCDC115Q96NT0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC115Q96NT0 AC108078.2-201ENST00000510750 236 ntBASIC0.91□□□□□ -2.26
CCDC115Q96NT0 TRMT112P2-201ENST00000512910 132 ntBASIC0.91□□□□□ -2.26
CCDC115Q96NT0 RNU6-1053P-201ENST00000515930 101 ntBASIC0.91□□□□□ -2.26
CCDC115Q96NT0 RNU6-678P-201ENST00000516832 109 ntBASIC0.91□□□□□ -2.26
CCDC115Q96NT0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.91□□□□□ -2.26
CCDC115Q96NT0 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC115Q96NT0 AC123912.5-201ENST00000605470 343 ntBASIC0.91□□□□□ -2.26
CCDC115Q96NT0 AC019226.1-201ENST00000625666 515 ntBASIC0.91□□□□□ -2.26
CCDC115Q96NT0 RNU6-359P-201ENST00000365466 108 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
CCDC115Q96NT0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC115Q96NT0 PIGPP2-201ENST00000411569 458 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 SRIP3-201ENST00000413200 219 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC115Q96NT0 NCOR1P3-201ENST00000420479 303 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 CST2P1-201ENST00000425770 87 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.9□□□□□ -2.27
CCDC115Q96NT0 AL365400.1-201ENST00000431854 640 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 RPL36AP53-201ENST00000432891 316 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 USP9YP22-201ENST00000438971 294 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 RNU7-140P-201ENST00000459546 60 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 AC108729.1-201ENST00000487812 947 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.9□□□□□ -2.27
CCDC115Q96NT0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.9□□□□□ -2.27
CCDC115Q96NT0 RNU5B-3P-201ENST00000516601 115 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 COPS8P3-201ENST00000526024 482 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 RAB11AP2-201ENST00000545905 639 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 RPL30P11-203ENST00000598995 310 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 BNIP3P27-201ENST00000599991 412 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 BNIP3P10-201ENST00000605360 577 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 AC034229.4-201ENST00000607861 441 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.9□□□□□ -2.27
CCDC115Q96NT0 TEX21P-201ENST00000447107 1476 ntBASIC0.9□□□□□ -2.27
CCDC115Q96NT0 RNY1P10-201ENST00000363268 113 ntBASIC0.89□□□□□ -2.27
CCDC115Q96NT0 Y_RNA.234-201ENST00000364409 97 ntBASIC0.89□□□□□ -2.27
CCDC115Q96NT0 RNU6-549P-201ENST00000384433 107 ntBASIC0.89□□□□□ -2.27
CCDC115Q96NT0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CCDC115Q96NT0 AL590084.2-201ENST00000401481 382 ntBASIC0.89□□□□□ -2.27
CCDC115Q96NT0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.89□□□□□ -2.27
CCDC115Q96NT0 GPM6BP2-201ENST00000432046 144 ntBASIC0.89□□□□□ -2.27
CCDC115Q96NT0 GPM6BP1-201ENST00000446387 144 ntBASIC0.89□□□□□ -2.27
CCDC115Q96NT0 TMEM251P1-201ENST00000503717 318 ntBASIC0.89□□□□□ -2.27
CCDC115Q96NT0 MTCYBP43-201ENST00000513621 740 ntBASIC0.89□□□□□ -2.27
CCDC115Q96NT0 AC110760.3-202ENST00000515177 371 ntBASIC0.89□□□□□ -2.27
CCDC115Q96NT0 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.89□□□□□ -2.27
CCDC115Q96NT0 WISP1-OT1-201ENST00000602893 642 ntBASIC0.89□□□□□ -2.27
CCDC115Q96NT0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.89□□□□□ -2.27
CCDC115Q96NT0 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.89□□□□□ -2.27
CCDC115Q96NT0 MTND5P9-201ENST00000503854 1755 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CCDC115Q96NT0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.88□□□□□ -2.27
CCDC115Q96NT0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CCDC115Q96NT0 MIR337-201ENST00000362281 93 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 RNU6-223P-201ENST00000362830 107 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 RNU6-1280P-201ENST00000365211 107 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.88□□□□□ -2.27
CCDC115Q96NT0 RNU6-321P-201ENST00000410912 106 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.88□□□□□ -2.27
CCDC115Q96NT0 MTND1P21-201ENST00000412991 285 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 USP9YP26-201ENST00000421008 661 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 USP9YP18-201ENST00000425912 695 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC115Q96NT0 AL135790.2-201ENST00000437701 267 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 AC092427.1-201ENST00000439177 601 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 USP9YP17-201ENST00000444617 696 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 OR6C5P-201ENST00000452388 923 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.88□□□□□ -2.27
CCDC115Q96NT0 RPS3AP22-201ENST00000488297 769 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 AC005840.1-201ENST00000498412 377 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 AC116655.1-201ENST00000508324 901 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 AC012414.6-201ENST00000568241 401 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.88□□□□□ -2.27
CCDC115Q96NT0 AL161798.1-201ENST00000604630 131 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 AC096772.1-201ENST00000609146 564 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 TUG1_2.1-201ENST00000614234 87 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 MIR6134-201ENST00000617606 109 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.88□□□□□ -2.27
CCDC115Q96NT0 AL589994.2-201ENST00000621124 579 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 MIR1322-201ENST00000638013 71 ntBASIC0.88□□□□□ -2.27
CCDC115Q96NT0 HAUS6P2-201ENST00000433254 2404 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CCDC115Q96NT0 RNU6-353P-201ENST00000364266 108 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 RNU6-53P-201ENST00000365367 106 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 AL133475.1-201ENST00000404414 305 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 RNU2-32P-201ENST00000411193 191 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 AL022400.1-201ENST00000423946 935 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 RNFT1P2-201ENST00000443064 757 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 FABP5P15-201ENST00000453566 214 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 RNU6-775P-201ENST00000459318 96 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 RPL37P6-201ENST00000460682 294 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 TOMM22P6-201ENST00000465035 409 ntBASIC0.87□□□□□ -2.27
CCDC115Q96NT0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.87□□□□□ -2.27
CCDC115Q96NT0 AP001025.1-201ENST00000486139 332 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms