Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC-0.01□□□□□ -2.41
CFAP54Q96N23 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
CFAP54Q96N23 AC010329.5-201ENST00000623497 2174 ntBASIC-0.01□□□□□ -2.41
CFAP54Q96N23 AL589655.1-201ENST00000405398 482 ntBASIC-0.01□□□□□ -2.41
CFAP54Q96N23 ZNF863P-201ENST00000426746 417 ntBASIC-0.01□□□□□ -2.41
CFAP54Q96N23 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC-0.01□□□□□ -2.41
CFAP54Q96N23 AC018659.1-201ENST00000551083 169 ntBASIC-0.01□□□□□ -2.41
CFAP54Q96N23 MIR3937-201ENST00000580135 106 ntBASIC-0.01□□□□□ -2.41
CFAP54Q96N23 RPL30P11-203ENST00000598995 310 ntBASIC-0.01□□□□□ -2.41
CFAP54Q96N23 AC021749.1-201ENST00000604322 607 ntBASIC-0.01□□□□□ -2.41
CFAP54Q96N23 AP003400.5-201ENST00000624827 617 ntBASIC-0.01□□□□□ -2.41
CFAP54Q96N23 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC-0.02□□□□□ -2.41
CFAP54Q96N23 SNORD44.1-201ENST00000363202 61 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 SNORA36.1-201ENST00000363424 132 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 RNU6-674P-201ENST00000363831 107 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 SETP11-201ENST00000473027 690 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 BET1P1-201ENST00000482276 359 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 AL049874.1-201ENST00000489560 388 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 OR8K4P-201ENST00000534608 872 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.02□□□□□ -2.41
CFAP54Q96N23 AC025588.4-201ENST00000615802 908 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 RNU4-54P-201ENST00000516428 129 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC-0.02□□□□□ -2.41
CFAP54Q96N23 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC-0.02□□□□□ -2.41
CFAP54Q96N23 MIR4764-201ENST00000580680 88 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 HMGN2P15-201ENST00000585707 270 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.02□□□□□ -2.41
CFAP54Q96N23 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 RNU6-945P-201ENST00000383947 107 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.02□□□□□ -2.41
CFAP54Q96N23 RPL22P18-201ENST00000417197 377 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 AC012414.6-201ENST00000568241 401 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 AL355297.3-201ENST00000604082 446 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 uc_338.34-201ENST00000617467 174 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 AL590410.1-201ENST00000617925 333 ntBASIC-0.02□□□□□ -2.41
CFAP54Q96N23 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.03□□□□□ -2.41
CFAP54Q96N23 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC-0.03□□□□□ -2.41
CFAP54Q96N23 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC-0.03□□□□□ -2.41
CFAP54Q96N23 MTCO3P45-201ENST00000443036 613 ntBASIC-0.03□□□□□ -2.41
CFAP54Q96N23 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC-0.03□□□□□ -2.41
CFAP54Q96N23 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC-0.03□□□□□ -2.41
CFAP54Q96N23 AC016256.1-201ENST00000547971 354 ntBASIC-0.03□□□□□ -2.41
CFAP54Q96N23 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.03□□□□□ -2.41
CFAP54Q96N23 FARSBP1-201ENST00000435808 1778 ntBASIC-0.03□□□□□ -2.41
CFAP54Q96N23 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC-0.03□□□□□ -2.41
CFAP54Q96N23 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC-0.03□□□□□ -2.41
CFAP54Q96N23 AC136619.2-201ENST00000563361 631 ntBASIC-0.03□□□□□ -2.41
CFAP54Q96N23 XIAPP1-201ENST00000603162 600 ntBASIC-0.03□□□□□ -2.41
CFAP54Q96N23 AC017083.3-201ENST00000609955 700 ntBASIC-0.03□□□□□ -2.41
CFAP54Q96N23 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC-0.03□□□□□ -2.41
CFAP54Q96N23 MIR635-201ENST00000384830 98 ntBASIC-0.04□□□□□ -2.42
CFAP54Q96N23 TRGV6-201ENST00000417928 299 ntBASIC-0.04□□□□□ -2.42
CFAP54Q96N23 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC-0.04□□□□□ -2.42
CFAP54Q96N23 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC-0.04□□□□□ -2.42
CFAP54Q96N23 PGBD4P5-201ENST00000445958 426 ntBASIC-0.04□□□□□ -2.42
CFAP54Q96N23 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC-0.04□□□□□ -2.42
CFAP54Q96N23 AC091805.2-201ENST00000603848 235 ntBASIC-0.04□□□□□ -2.42
CFAP54Q96N23 AC090517.2-201ENST00000614966 680 ntBASIC-0.04□□□□□ -2.42
CFAP54Q96N23 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC-0.04□□□□□ -2.42
CFAP54Q96N23 AC138393.1-203ENST00000327086 343 ntBASIC-0.04□□□□□ -2.42
CFAP54Q96N23 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC-0.04□□□□□ -2.42
CFAP54Q96N23 AC069282.1-201ENST00000411911 526 ntBASIC-0.04□□□□□ -2.42
CFAP54Q96N23 RAP1BP2-201ENST00000478270 544 ntBASIC-0.04□□□□□ -2.42
CFAP54Q96N23 TRBVA-201ENST00000498804 316 ntBASIC-0.04□□□□□ -2.42
CFAP54Q96N23 OR5AK4P-201ENST00000635912 903 ntBASIC-0.04□□□□□ -2.42
CFAP54Q96N23 AC009950.2-201ENST00000636548 183 ntBASIC-0.04□□□□□ -2.42
CFAP54Q96N23 RNU4-48P-201ENST00000365559 182 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 RNU6-1218P-201ENST00000458990 108 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AC090142.3-201ENST00000519012 385 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AC087897.1-201ENST00000550134 156 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 RAC1P9-201ENST00000604990 392 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 RNU6-225P-201ENST00000384613 103 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AL356320.2-201ENST00000417263 507 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC-0.05□□□□□ -2.42
CFAP54Q96N23 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC-0.05□□□□□ -2.42
CFAP54Q96N23 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AC069114.2-201ENST00000604699 304 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 RNU4-5P-201ENST00000607255 135 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AL353149.1-201ENST00000610667 244 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AC020923.1-201ENST00000624021 917 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AC027335.2-201ENST00000624030 375 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
CFAP54Q96N23 MIR19B1-201ENST00000384829 87 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AL136372.1-201ENST00000403060 228 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AC093106.2-201ENST00000428212 385 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.05□□□□□ -2.42
CFAP54Q96N23 SNORA68.3-201ENST00000515906 83 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 MIR4431-201ENST00000579990 94 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AL355877.2-201ENST00000603670 358 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 AL592221.1-201ENST00000605266 382 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 MIR6134-201ENST00000617606 109 ntBASIC-0.05□□□□□ -2.42
CFAP54Q96N23 CR848007.1-201ENST00000442354 1699 ntBASIC-0.06□□□□□ -2.42
CFAP54Q96N23 AC009310.1-201ENST00000414414 451 ntBASIC-0.06□□□□□ -2.42
CFAP54Q96N23 RPL21P32-201ENST00000419877 477 ntBASIC-0.06□□□□□ -2.42
CFAP54Q96N23 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms