Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 AL157871.3-201ENST00000557231 293 ntBASIC4.7□□□□□ -1.66
TRIM11Q96F44 MTND6P33-201ENST00000571794 183 ntBASIC4.7□□□□□ -1.66
TRIM11Q96F44 MIR548X2-201ENST00000579776 100 ntBASIC4.7□□□□□ -1.66
TRIM11Q96F44 MIR4270-201ENST00000581799 70 ntBASIC4.7□□□□□ -1.66
TRIM11Q96F44 AC008749.1-201ENST00000597650 306 ntBASIC4.7□□□□□ -1.66
TRIM11Q96F44 AL160290.3-201ENST00000604869 165 ntBASIC4.7□□□□□ -1.66
TRIM11Q96F44 FAM25E-202ENST00000608562 189 ntBASIC4.7□□□□□ -1.66
TRIM11Q96F44 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM11Q96F44 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM11Q96F44 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM11Q96F44 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM11Q96F44 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM11Q96F44 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM11Q96F44 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM11Q96F44 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM11Q96F44 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM11Q96F44 AC010300.1-201ENST00000600671 5134 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM11Q96F44 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
TRIM11Q96F44 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM11Q96F44 RNU6-222P-201ENST00000362438 107 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 RNU6-653P-201ENST00000363074 106 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 Y_RNA.123-201ENST00000363338 102 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 SNORD113.2-201ENST00000364166 89 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 RNU6-395P-201ENST00000365662 106 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 SNORA70F-201ENST00000384142 135 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 RNU6-318P-201ENST00000384283 103 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 SNORA70E-201ENST00000384492 135 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 MT-TC-201ENST00000387405 66 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 MIR550A3-201ENST00000390735 95 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 RPS4XP3-201ENST00000398541 413 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 RNA5SP239-201ENST00000410218 129 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 AL390729.2-201ENST00000416137 156 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 AL592045.1-201ENST00000429867 352 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 AL358472.1-201ENST00000431295 329 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM11Q96F44 snoU13.30-201ENST00000458951 104 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 AC010469.1-201ENST00000463864 576 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 RPL23AP45-201ENST00000476406 468 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 RPS4XP22-201ENST00000480755 780 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM11Q96F44 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM11Q96F44 APOOP4-201ENST00000513530 597 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 HIGD1AP3-201ENST00000515857 278 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 AP001781.1-201ENST00000530977 207 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM11Q96F44 AC005520.5-201ENST00000613926 164 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM11Q96F44 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM11Q96F44 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
TRIM11Q96F44 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
TRIM11Q96F44 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM11Q96F44 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
TRIM11Q96F44 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM11Q96F44 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM11Q96F44 AC015813.6-201ENST00000624409 5808 ntBASIC4.69□□□□□ -1.66
TRIM11Q96F44 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM11Q96F44 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM11Q96F44 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TRIM11Q96F44 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM11Q96F44 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM11Q96F44 RNU1-15P-201ENST00000353977 144 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 RNU6-384P-201ENST00000364900 104 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 RNU4-9P-201ENST00000364951 139 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 MIR659-201ENST00000384963 97 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 MIR301A-201ENST00000385261 86 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
TRIM11Q96F44 AL160275.2-201ENST00000412010 394 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 RPS20P14-201ENST00000412545 360 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM11Q96F44 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM11Q96F44 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 RAB28P5-201ENST00000427490 651 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.68□□□□□ -1.66
TRIM11Q96F44 RPS15AP7-201ENST00000439294 405 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 PPBPP1-201ENST00000510807 373 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 AC093840.1-201ENST00000511599 336 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 RNU4-57P-201ENST00000515980 135 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM11Q96F44 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM11Q96F44 AC060766.3-201ENST00000591442 263 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 RPL23AP88-201ENST00000605759 454 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 AC005828.6-201ENST00000606610 232 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 AL008718.3-201ENST00000610217 321 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 MIR6891-201ENST00000618788 93 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 AP005019.3-201ENST00000620418 560 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM11Q96F44 AC106871.1-201ENST00000568324 3102 ntBASIC4.68□□□□□ -1.66
TRIM11Q96F44 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM11Q96F44 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM11Q96F44 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.68□□□□□ -1.66
TRIM11Q96F44 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM11Q96F44 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM11Q96F44 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.67□□□□□ -1.66
TRIM11Q96F44 Y_RNA.33-201ENST00000362591 102 ntBASIC4.67□□□□□ -1.66
TRIM11Q96F44 Y_RNA.217-201ENST00000364214 105 ntBASIC4.67□□□□□ -1.66
TRIM11Q96F44 RNU4-56P-201ENST00000364700 142 ntBASIC4.67□□□□□ -1.66
TRIM11Q96F44 RNU6-818P-201ENST00000364837 108 ntBASIC4.67□□□□□ -1.66
TRIM11Q96F44 RNU6-898P-201ENST00000365627 104 ntBASIC4.67□□□□□ -1.66
TRIM11Q96F44 RNU6-80P-201ENST00000384195 107 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms