Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MAPK10-373ENST00000641983 6772 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 ZNF826P-207ENST00000622273 1910 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 RNU6-1252P-201ENST00000363054 104 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 Y_RNA.263-201ENST00000364659 114 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 SNORD81.2-201ENST00000365153 76 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 SNORA75B-201ENST00000384053 137 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 RAP1BP3-201ENST00000407180 549 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 RNU2-41P-201ENST00000410991 178 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 PDCL2P1-201ENST00000419302 352 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 AC006989.1-201ENST00000427212 131 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 MYL8P-204ENST00000431574 518 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 BRK1P2-201ENST00000442875 223 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 RPL37P4-201ENST00000448908 268 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 HMGB3P8-201ENST00000449709 577 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 AL583843.1-201ENST00000456070 346 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 RNU7-66P-201ENST00000459469 62 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 RNU6-572P-201ENST00000516724 80 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.53□□□□□ -1.84
TRIM43Q96BQ3 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
TRIM43Q96BQ3 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 SNORD3E-201ENST00000362899 217 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 MT-TD-201ENST00000387419 68 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 MIR888-201ENST00000401186 77 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 NCOR1P3-201ENST00000420479 303 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 AC098614.2-201ENST00000426040 255 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 AL078601.1-201ENST00000444542 271 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 RNU6-864P-201ENST00000516256 108 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 IGHV3-76-201ENST00000522465 295 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 SCOCP1-201ENST00000554676 349 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 AC026464.5-201ENST00000562497 722 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 FGF7P1-201ENST00000582820 288 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 AC243960.4-201ENST00000600532 288 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 HSPE1P7-201ENST00000604681 321 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 AC007938.3-201ENST00000604965 623 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 MIR486-1-201ENST00000612171 68 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 RMST_4.1-201ENST00000616886 107 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 AC104985.2-201ENST00000620598 500 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 AC006111.3-201ENST00000622137 383 ntBASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
TRIM43Q96BQ3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 RNU6-254P-201ENST00000363377 107 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 RNU6-884P-201ENST00000363889 107 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 SNORA40C-201ENST00000391285 128 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 MIR450B-201ENST00000401182 78 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 RPL26P27-201ENST00000414397 437 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 EEF1A1P41-201ENST00000414667 207 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 RPL23AP82-202ENST00000427528 469 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 AL627311.1-201ENST00000431514 115 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 AL357552.1-201ENST00000445254 415 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 NDUFB1P2-201ENST00000449477 176 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 RPS29P26-201ENST00000477483 171 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 RN7SKP132-201ENST00000516001 208 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 RNU6-1069P-201ENST00000516612 133 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 RNU6-273P-201ENST00000516937 96 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 RNU6-323P-201ENST00000521915 107 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 MIR4782-201ENST00000577987 79 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 MIR5692C1-201ENST00000585309 91 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 AL645944.1-201ENST00000603857 493 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 AC021646.1-201ENST00000605469 484 ntBASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TRIM43Q96BQ3 AL136360.1-201ENST00000503377 1900 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms