Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 Y_RNA.510-201ENST00000384511 114 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 MIR218-1-201ENST00000384999 110 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 HMGN2P35-201ENST00000412164 270 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 AL591212.2-201ENST00000433923 257 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 FABP5P14-201ENST00000437273 393 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 BRK1P2-201ENST00000442875 223 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.61□□□□□ -1.99
RTL3Q8N8U3 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 RPS3P1-201ENST00000456781 192 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 AC093899.1-201ENST00000457984 376 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 SRRM1P2-201ENST00000464531 1192 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.61□□□□□ -1.99
RTL3Q8N8U3 RNU6-506P-201ENST00000516553 94 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 RNU6-445P-201ENST00000516949 107 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 CKS1BP7-201ENST00000522230 235 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.61□□□□□ -1.99
RTL3Q8N8U3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.61□□□□□ -1.99
RTL3Q8N8U3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.61□□□□□ -1.99
RTL3Q8N8U3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RTL3Q8N8U3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.61□□□□□ -1.99
RTL3Q8N8U3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RTL3Q8N8U3 MIR3162-201ENST00000581818 82 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 MIR5194-201ENST00000582634 120 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 MIR4658-201ENST00000584344 65 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 AC091152.3-201ENST00000604227 325 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 AP000787.2-201ENST00000604432 568 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 AC073534.2-201ENST00000620377 381 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 AC124864.2-201ENST00000624736 186 ntBASIC2.61□□□□□ -1.99
RTL3Q8N8U3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.61□□□□□ -1.99
RTL3Q8N8U3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 Y_RNA.22-201ENST00000362492 102 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 Y_RNA.159-201ENST00000363674 87 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 RNU5E-6P-201ENST00000365574 115 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 SMIM11P1-201ENST00000369586 178 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 RNU6-517P-201ENST00000384362 110 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 MIR27B-201ENST00000385129 97 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 MIR634-201ENST00000385208 97 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 RNU6-220P-201ENST00000390919 107 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 RPS4XP8-201ENST00000402039 771 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 ELOCP4-201ENST00000420090 333 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 MTCO2P19-201ENST00000427513 598 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 SUMO1P4-201ENST00000429430 302 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 C8orf59P1-201ENST00000429930 303 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 MICF-203ENST00000432679 129 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 MTND1P4-201ENST00000435196 415 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 HMGB3P12-201ENST00000438745 556 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 RNU4-29P-201ENST00000515943 174 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 RNA5SP320-201ENST00000516263 124 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 AL391646.1-201ENST00000603860 190 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 MIR98-201ENST00000606724 119 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 MIR6817-201ENST00000615588 66 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 HMGB1P24-202ENST00000615653 685 ntBASIC2.6□□□□□ -1.99
RTL3Q8N8U3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTL3Q8N8U3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.59□□□□□ -1.99
RTL3Q8N8U3 SNORD56.2-201ENST00000363242 71 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 RNU6-1097P-201ENST00000363586 107 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 RNU6-188P-201ENST00000364207 107 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 Y_RNA.296-201ENST00000364930 108 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 RNU6-190P-201ENST00000384154 102 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 RNU6-39P-201ENST00000384344 107 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 MIR558-201ENST00000384920 94 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 UBE2V1P10-201ENST00000414685 269 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AC093106.2-201ENST00000428212 385 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.59□□□□□ -1.99
RTL3Q8N8U3 Z98742.2-201ENST00000431564 187 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AC092001.1-201ENST00000453012 261 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 SCARNA24.1-201ENST00000516465 137 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 RNU7-51P-201ENST00000516560 62 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 RNU6-572P-201ENST00000516724 80 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AP003122.3-201ENST00000526316 255 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AC084851.1-201ENST00000529105 249 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AC009163.5-201ENST00000575421 637 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AC008121.1-201ENST00000603244 268 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AC174048.1-201ENST00000603389 144 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AC006023.1-201ENST00000603944 259 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AP002360.4-201ENST00000606980 481 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AC022893.3-201ENST00000607665 437 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AC017083.3-201ENST00000609955 700 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 U4.5-201ENST00000617137 123 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 AL359880.1-201ENST00000621879 266 ntBASIC2.59□□□□□ -1.99
RTL3Q8N8U3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 158 ms