Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 U6.99-201ENST00000637524 83 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 FAM35DP-201ENST00000323387 2712 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 MTND5P27-201ENST00000428871 1720 ntBASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.87□□□□□ -1.79
TRIM48Q8IWZ4 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 SNORD50.1-201ENST00000362987 71 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-379P-201ENST00000363813 104 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-595P-201ENST00000363944 107 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 Y_RNA.214-201ENST00000364201 112 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 ELOCP20-201ENST00000422460 345 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 SNRPEP9-201ENST00000436794 238 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 AC104564.1-201ENST00000493028 407 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 AC025554.1-201ENST00000505641 188 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-377P-201ENST00000515965 102 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-388P-201ENST00000517012 105 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-389P-201ENST00000517048 105 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 RNU1-45P-201ENST00000517191 141 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 AC023632.4-201ENST00000517783 191 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 AC144568.1-201ENST00000520139 137 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 MIR5696-201ENST00000578474 85 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 MIR1254-2-201ENST00000579553 63 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 AC006557.5-201ENST00000603126 811 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 AL138825.1-201ENST00000618587 192 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 AC099506.2-201ENST00000623074 221 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 AC034229.5-201ENST00000624258 185 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 AC112200.1-201ENST00000625015 234 ntBASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.86□□□□□ -1.79
TRIM48Q8IWZ4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 RNA5SP399-201ENST00000364003 117 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-806P-201ENST00000365147 105 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-708P-201ENST00000384217 107 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 MIR134-201ENST00000385258 73 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-700P-201ENST00000391043 107 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 SNORA3C-201ENST00000408792 125 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 AC078918.1-201ENST00000498515 228 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 IGKV2-38-201ENST00000517443 247 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 HSPE1P5-201ENST00000561489 272 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 MIR5701-3-201ENST00000578890 82 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 MIR5701-1-201ENST00000585138 82 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 AC125232.2-201ENST00000592457 143 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 VN1R91P-201ENST00000594377 169 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 AC025946.2-201ENST00000603398 234 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 RAC1P9-201ENST00000604990 392 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 AC006023.2-201ENST00000609916 167 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 MIR5701-2-201ENST00000615634 82 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 AL354798.1-201ENST00000622505 329 ntBASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.85□□□□□ -1.79
TRIM48Q8IWZ4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 MTND5P7-201ENST00000413558 1798 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-874P-201ENST00000362390 105 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 Y_RNA.64-201ENST00000362845 102 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 RNU5E-7P-201ENST00000365290 117 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 RNU6-713P-201ENST00000384761 107 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 RNU6ATAC-201ENST00000408749 126 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 RN7SKP27-201ENST00000410684 333 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 RN7SKP58-201ENST00000411010 305 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 CYCSP19-201ENST00000411715 316 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 AC007098.1-201ENST00000420122 367 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 EIF4EP2-201ENST00000422816 654 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 Z82210.1-201ENST00000440037 231 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 RN7SL323P-201ENST00000494712 295 ntBASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.84□□□□□ -1.79
TRIM48Q8IWZ4 RNY3P15-201ENST00000516297 97 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms