Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNU6-166P-201ENST00000384371 107 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 SNORA75.6-201ENST00000391318 127 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 PGBD4P6-201ENST00000421501 610 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.58□□□□□ -1.68
USP48Q86UV5 USMG5P1-201ENST00000425964 177 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 AC098614.2-201ENST00000426040 255 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 HMGB1P37-201ENST00000439613 609 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 AL035666.1-201ENST00000446195 348 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.58□□□□□ -1.68
USP48Q86UV5 PCMTD1P1-201ENST00000455560 355 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 RPL32P34-201ENST00000486380 400 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 RNU6-307P-201ENST00000516743 106 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.58□□□□□ -1.68
USP48Q86UV5 AC011494.1-201ENST00000596454 237 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.58□□□□□ -1.68
USP48Q86UV5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.58□□□□□ -1.68
USP48Q86UV5 AC011890.2-201ENST00000613393 294 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 AC092608.2-201ENST00000624427 218 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 Z69720.2-201ENST00000624755 279 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 AC022336.2-201ENST00000568966 2538 ntBASIC4.58□□□□□ -1.68
USP48Q86UV5 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
USP48Q86UV5 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.58□□□□□ -1.68
USP48Q86UV5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.57□□□□□ -1.68
USP48Q86UV5 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.57□□□□□ -1.68
USP48Q86UV5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-37P-201ENST00000362692 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNA5SP50-201ENST00000363731 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-11P-201ENST00000364234 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-7-201ENST00000364784 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-8-201ENST00000365467 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-25P-201ENST00000383873 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-1-201ENST00000383898 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-1032P-201ENST00000384100 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-48P-201ENST00000384161 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-36P-201ENST00000384172 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-4P-201ENST00000384205 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-5P-201ENST00000384238 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-3P-201ENST00000384314 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-16P-201ENST00000384385 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-15P-201ENST00000384534 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-2-201ENST00000384627 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-29P-201ENST00000384637 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-9-201ENST00000384776 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-33P-201ENST00000384793 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
USP48Q86UV5 AL030996.1-201ENST00000411430 235 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RAC1P3-201ENST00000416129 580 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.57□□□□□ -1.68
USP48Q86UV5 YPEL5P1-201ENST00000419731 367 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USP48Q86UV5 MTCYBP9-201ENST00000431021 303 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.57□□□□□ -1.68
USP48Q86UV5 AC092798.1-201ENST00000458542 409 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.57□□□□□ -1.68
USP48Q86UV5 RPS4XP13-201ENST00000483219 789 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USP48Q86UV5 RNA5SP309-201ENST00000516670 106 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 CASP1P1-201ENST00000526345 212 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 RNU6-6P-201ENST00000606623 107 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 AL591516.1-201ENST00000611326 274 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 PLCE1P1-201ENST00000622094 305 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP48Q86UV5 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.57□□□□□ -1.68
USP48Q86UV5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
USP48Q86UV5 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP48Q86UV5 AC008725.1-201ENST00000605123 2263 ntBASIC4.57□□□□□ -1.68
USP48Q86UV5 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP48Q86UV5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.56□□□□□ -1.68
USP48Q86UV5 Y_RNA.158-201ENST00000363651 101 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 Y_RNA.193-201ENST00000363979 102 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 RNU6-217P-201ENST00000384164 104 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 AC096664.2-201ENST00000411843 406 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 MCFD2P1-201ENST00000417812 300 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.56□□□□□ -1.68
USP48Q86UV5 AL158071.1-201ENST00000430315 461 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 RPS3AP46-201ENST00000448352 682 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 MTATP8P1-201ENST00000467115 207 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 RN7SL601P-201ENST00000471221 293 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.56□□□□□ -1.68
USP48Q86UV5 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.56□□□□□ -1.68
USP48Q86UV5 AC005899.2-201ENST00000584353 90 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 BRDTP1-201ENST00000605735 677 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 RNU1-30P-201ENST00000606575 163 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 AL110115.1-201ENST00000614396 364 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 MIR8058-201ENST00000615737 89 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 AC007485.1-201ENST00000616755 206 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.56□□□□□ -1.68
USP48Q86UV5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP48Q86UV5 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP48Q86UV5 AC006504.1-201ENST00000562493 3666 ntBASIC4.56□□□□□ -1.68
USP48Q86UV5 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP48Q86UV5 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
USP48Q86UV5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP48Q86UV5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP48Q86UV5 FAM35BP-202ENST00000497389 3337 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.55□□□□□ -1.68
USP48Q86UV5 FTLP6-201ENST00000355274 422 ntBASIC4.55□□□□□ -1.68
USP48Q86UV5 Y_RNA.2-201ENST00000362330 96 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms