Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 Y_RNA.43-201ENST00000362670 111 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 RNU6-1249P-201ENST00000363237 111 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 RNU4-84P-201ENST00000364200 139 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 RNU6-1175P-201ENST00000365200 107 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 Y_RNA.357-201ENST00000365487 109 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4DQ86TL0 RNU6-17P-201ENST00000384245 107 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 SNORA36C-201ENST00000384289 132 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 RNU6-18P-201ENST00000384527 107 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 Y_RNA.570-201ENST00000384750 101 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 MIR10A-201ENST00000385043 110 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 SNORA40-201ENST00000388090 126 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 MIR3065-201ENST00000390137 79 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 UBA52P6-201ENST00000399822 382 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 LAP3P1-201ENST00000403648 294 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 RNU2-2P-201ENST00000410396 191 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 AC099336.2-201ENST00000422457 254 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4□□□□□ -1.77
ATG4DQ86TL0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4□□□□□ -1.77
ATG4DQ86TL0 POLR2KP2-201ENST00000438155 177 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 GEMIN8P3-201ENST00000445417 720 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 AC099560.2-201ENST00000457554 255 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4□□□□□ -1.77
ATG4DQ86TL0 RPL23AP75-201ENST00000491601 451 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 PDCD5P2-201ENST00000507570 312 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 AC093840.1-201ENST00000511599 336 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 RNU6-567P-201ENST00000516746 107 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 IGLVIV-65-201ENST00000517313 360 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 AC084851.1-201ENST00000529105 249 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4□□□□□ -1.77
ATG4DQ86TL0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4□□□□□ -1.77
ATG4DQ86TL0 RNU2-4P-201ENST00000606190 192 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 U2.15-201ENST00000611544 191 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 U2.16-201ENST00000613119 191 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 U2.12-201ENST00000613778 191 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 U2.9-201ENST00000615427 191 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4DQ86TL0 U2.11-201ENST00000616345 191 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 U2.2-201ENST00000616535 191 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 U2.3-201ENST00000617785 191 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4□□□□□ -1.77
ATG4DQ86TL0 U2.19-201ENST00000618602 191 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 RNU2-1-201ENST00000618664 191 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 U2.6-201ENST00000619225 191 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 U2.5-201ENST00000619465 191 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 U2.10-201ENST00000620268 191 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 AP005019.3-201ENST00000620418 560 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 AC006001.4-201ENST00000622243 395 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4□□□□□ -1.77
ATG4DQ86TL0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4□□□□□ -1.77
ATG4DQ86TL0 AC110774.1-201ENST00000623567 2018 ntBASIC4□□□□□ -1.77
ATG4DQ86TL0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4□□□□□ -1.77
ATG4DQ86TL0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4□□□□□ -1.77
ATG4DQ86TL0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 AC025031.4-201ENST00000621248 3271 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 SNORA63.4-201ENST00000362763 126 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 RNU6-1167P-201ENST00000363227 94 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 Y_RNA.136-201ENST00000363444 102 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 RNU6-961P-201ENST00000363893 105 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 Y_RNA.217-201ENST00000364214 105 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 RNU6-336P-201ENST00000364891 107 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 Y_RNA.412-201ENST00000384001 104 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 MIR32-201ENST00000384965 70 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 RNU6-882P-201ENST00000391025 103 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 AL022722.2-201ENST00000402519 180 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 RNA5SP146-201ENST00000410743 123 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 MIR1911-201ENST00000410783 80 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 RAB28P5-201ENST00000427490 651 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 AL137159.1-201ENST00000452808 512 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 Y_RNA.641-201ENST00000459414 105 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 RN7SL385P-201ENST00000468873 276 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 AC104164.2-201ENST00000496953 495 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 YWHAEP4-201ENST00000505390 198 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 RNU6-377P-201ENST00000515965 102 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 AC024614.2-201ENST00000577584 372 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 MIR5692C2-201ENST00000577959 77 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 MIR4284-201ENST00000578924 81 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 MIR3684-201ENST00000579779 74 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 AC079587.1-201ENST00000603846 277 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 BMS1P21-201ENST00000634565 365 ntBASIC3.99□□□□□ -1.77
ATG4DQ86TL0 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
ATG4DQ86TL0 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ATG4DQ86TL0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms