Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MIR608-201ENST00000384820 100 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 OFD1P18Y-201ENST00000420889 959 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 USP9YP26-201ENST00000421008 661 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 USP9YP18-201ENST00000425912 695 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 USP9YP24-201ENST00000434374 697 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 USP9YP17-201ENST00000444617 696 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AL096803.2-201ENST00000450032 677 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 BOLA3P3-201ENST00000505182 232 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC006001.4-201ENST00000622243 395 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC005832.2-201ENST00000538921 1430 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 RNU5E-1-201ENST00000362477 120 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 RNA5SP368-201ENST00000364298 116 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 RPS29P8-201ENST00000445109 171 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC141557.1-201ENST00000540982 400 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC105224.1-201ENST00000587055 421 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 RNU6-110P-201ENST00000384508 104 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 RNU6-700P-201ENST00000391043 107 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 DDX3P2-201ENST00000446138 111 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC010631.1-201ENST00000474150 156 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC092474.3-201ENST00000603022 568 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AP002826.1-201ENST00000608835 315 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AL513185.3-201ENST00000433335 1300 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 RNU6-48P-201ENST00000384161 107 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC007742.1-201ENST00000425789 329 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 ELOCP26-201ENST00000436067 329 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC108729.1-201ENST00000487812 947 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC004923.2-201ENST00000529649 369 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC004492.1-201ENST00000607036 742 ntBASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
VPS13BQ7Z7G8 MT-TQ-201ENST00000387372 72 ntBASIC0.09□□□□□ -2.39
VPS13BQ7Z7G8 MTCO1P53-201ENST00000441633 699 ntBASIC0.09□□□□□ -2.39
VPS13BQ7Z7G8 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.09□□□□□ -2.39
VPS13BQ7Z7G8 SNRPGP17-201ENST00000603780 214 ntBASIC0.09□□□□□ -2.39
VPS13BQ7Z7G8 AL009028.1-201ENST00000604895 802 ntBASIC0.09□□□□□ -2.39
VPS13BQ7Z7G8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.09□□□□□ -2.39
VPS13BQ7Z7G8 MIR198-201ENST00000637333 62 ntBASIC0.09□□□□□ -2.39
VPS13BQ7Z7G8 RNU6-748P-201ENST00000384648 107 ntBASIC0.09□□□□□ -2.4
VPS13BQ7Z7G8 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
VPS13BQ7Z7G8 RPS3AP36-201ENST00000398190 775 ntBASIC0.09□□□□□ -2.4
VPS13BQ7Z7G8 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.09□□□□□ -2.4
VPS13BQ7Z7G8 AL669831.1-202ENST00000428504 417 ntBASIC0.09□□□□□ -2.4
VPS13BQ7Z7G8 AC145146.1-201ENST00000496370 254 ntBASIC0.09□□□□□ -2.4
VPS13BQ7Z7G8 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.09□□□□□ -2.4
VPS13BQ7Z7G8 MIR6130-201ENST00000619419 109 ntBASIC0.09□□□□□ -2.4
VPS13BQ7Z7G8 OR5H6-203ENST00000642105 978 ntBASIC0.09□□□□□ -2.4
VPS13BQ7Z7G8 MIR411-201ENST00000362239 96 ntBASIC0.09□□□□□ -2.4
VPS13BQ7Z7G8 PNPLA4P1-201ENST00000458328 305 ntBASIC0.09□□□□□ -2.4
VPS13BQ7Z7G8 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.09□□□□□ -2.4
VPS13BQ7Z7G8 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.09□□□□□ -2.4
VPS13BQ7Z7G8 RNU6-1249P-201ENST00000363237 111 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 AL589994.1-201ENST00000404962 340 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 AL355615.1-201ENST00000406187 641 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 RPS26P45-201ENST00000471748 340 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 TRBV8-1-201ENST00000481590 279 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 AC090115.3-201ENST00000553218 849 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 AC055764.2-201ENST00000610089 670 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 MIR518D-201ENST00000385014 87 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 MIR1302-8-201ENST00000408342 128 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 RNU2-36P-201ENST00000410361 191 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 RPS3AP37-201ENST00000419176 745 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 RSU1P2-202ENST00000437884 485 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 snoU13.9-201ENST00000458927 103 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 AC034114.1-201ENST00000520293 285 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 Y_RNA.757-201ENST00000578934 114 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 AC011155.2-201ENST00000623202 216 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 RNU6-263P-201ENST00000363811 107 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 RPL21P111-201ENST00000418453 477 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 COX6CP6-201ENST00000490840 228 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 MIR4645-201ENST00000583158 77 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 ZNF663P-202ENST00000641770 1131 ntBASIC0.08□□□□□ -2.4
VPS13BQ7Z7G8 OR5T3-201ENST00000303059 1023 ntBASIC0.07□□□□□ -2.4
VPS13BQ7Z7G8 Y_RNA.572-201ENST00000384757 98 ntBASIC0.07□□□□□ -2.4
VPS13BQ7Z7G8 AL356776.1-201ENST00000406574 447 ntBASIC0.07□□□□□ -2.4
VPS13BQ7Z7G8 AC010099.3-201ENST00000423896 409 ntBASIC0.07□□□□□ -2.4
VPS13BQ7Z7G8 AC092634.2-201ENST00000428146 1010 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms