Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 RNU6-1154P-201ENST00000391001 104 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 Y_RNA.629-201ENST00000411368 105 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 COX6CP10-201ENST00000416832 224 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 RPL21P38-201ENST00000418090 167 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 AC092634.6-201ENST00000418558 192 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 CST9LP2-201ENST00000437612 320 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 UBE2V1P5-201ENST00000440070 405 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 AL118520.1-201ENST00000450770 291 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 MTCO3P8-201ENST00000453691 755 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 RN7SL863P-201ENST00000462370 296 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 AC004801.2-202ENST00000463559 283 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 AC126389.1-201ENST00000477436 290 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 AC022493.2-201ENST00000506122 481 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 SNORA25.11-201ENST00000515935 105 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 RNU1-143P-201ENST00000516296 146 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 RNU6-1016P-201ENST00000516689 94 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 SNORA31.18-201ENST00000517043 134 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 U1.23-201ENST00000610293 146 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 RNU1-68P-201ENST00000615382 146 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 U1.39-201ENST00000621562 146 ntBASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
BHLHA9Q7RTU4 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
BHLHA9Q7RTU4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
BHLHA9Q7RTU4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
BHLHA9Q7RTU4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 Y_RNA.19-201ENST00000362462 99 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 Y_RNA.22-201ENST00000362492 102 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 Y_RNA.65-201ENST00000362846 100 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 RNU6-492P-201ENST00000363035 104 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 RNU6-1255P-201ENST00000363434 112 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 Y_RNA.200-201ENST00000364018 102 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 SNORA54-201ENST00000384281 123 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 SNORA11C-201ENST00000408532 129 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 Y_RNA.594-201ENST00000410373 140 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 RN7SKP51-201ENST00000410781 304 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AL035461.1-201ENST00000421490 332 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AC004383.1-201ENST00000438135 289 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 RPS15AP27-201ENST00000449183 343 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 BX276092.4-201ENST00000452056 248 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 HMGB3P30-201ENST00000457863 606 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 TRBVB-201ENST00000477100 408 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AC006445.1-201ENST00000491925 405 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AC090453.1-201ENST00000495560 436 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 PDCD5P2-201ENST00000507570 312 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 RNU6-313P-201ENST00000516317 112 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 RNU6-861P-201ENST00000516745 106 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 RN7SKP57-201ENST00000517248 293 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AC093519.1-201ENST00000566109 298 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AC090517.1-201ENST00000569307 266 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 MIR4643-201ENST00000577473 78 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AP001485.1-201ENST00000604799 199 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AL138726.1-201ENST00000614873 333 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AC073476.4-201ENST00000628409 72 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AC010149.2-201ENST00000637608 315 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 AL109809.4-201ENST00000603520 2185 ntBASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BHLHA9Q7RTU4 ZNF72P-201ENST00000425869 1908 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 Y_RNA.25-201ENST00000362528 102 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 SNORD113-7-201ENST00000363762 77 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 SNORD14.1-201ENST00000365609 90 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 Y_RNA.424-201ENST00000384063 103 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 MIR320C1-201ENST00000408566 88 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 MIR1298-201ENST00000408783 112 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 RNU6-1050P-201ENST00000410388 107 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 Y_RNA.793-201ENST00000411222 111 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 ARL5AP1-201ENST00000418991 388 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 AL139396.1-201ENST00000421137 167 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 PSMA2P3-201ENST00000429685 675 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 FCF1P4-201ENST00000448326 183 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 RPL29P29-201ENST00000448725 423 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 MTCO3P2-201ENST00000457365 171 ntBASIC3.32□□□□□ -1.88
BHLHA9Q7RTU4 LINC01399-202ENST00000458450 244 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms