Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNY3P4-201ENST00000384428 101 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 MIR141-201ENST00000384975 95 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 MIR1290-201ENST00000408735 78 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 RNU2-68P-201ENST00000410878 191 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 TMEM167AP1-201ENST00000423409 219 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 RPL21P40-201ENST00000428586 483 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 SNORD108-201ENST00000459332 71 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 SNORA31.6-201ENST00000516241 130 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 RNU6-1338P-201ENST00000516328 91 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.700-201ENST00000516806 100 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 RNA5SP143-201ENST00000516936 115 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 RN7SKP272-201ENST00000516988 232 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 U4.7-201ENST00000638126 106 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.04□□□□□ -1.76
RNF111Q6ZNA4 LINC02555-201ENST00000563933 1951 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 RNU1-35P-201ENST00000362782 153 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 RNU6-1266P-201ENST00000362794 105 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 RNU6-78P-201ENST00000362897 107 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 RPS29P13-201ENST00000402041 169 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 MRPL35P1-201ENST00000404272 572 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 RPL23AP48-201ENST00000406913 488 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.602-201ENST00000410535 92 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 Z82188.1-201ENST00000436709 154 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 RPL23AP52-201ENST00000439311 478 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 RN7SL303P-201ENST00000469773 251 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 ANXA2P1-201ENST00000505539 926 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 SNORA70.16-201ENST00000516390 95 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 SCARNA24.2-201ENST00000516968 130 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 SNORA31.18-201ENST00000517043 134 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 AC053481.4-201ENST00000583164 216 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 AC060766.3-201ENST00000591442 263 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 Y_RNA.772-201ENST00000606692 102 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 MIR486-1-201ENST00000612171 68 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 FTX_2.1-201ENST00000618816 94 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 U6.99-201ENST00000637524 83 ntBASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
RNF111Q6ZNA4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
RNF111Q6ZNA4 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 SNORD81.1-201ENST00000363064 77 ntBASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 Y_RNA.269-201ENST00000364685 89 ntBASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 RNU6-1181P-201ENST00000384191 106 ntBASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 AL079342.1-201ENST00000401460 267 ntBASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 BX679664.1-201ENST00000434429 253 ntBASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 NUTF2P7-201ENST00000453086 375 ntBASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 BTF3L4P4-201ENST00000506381 449 ntBASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 IGKV2-38-201ENST00000517443 247 ntBASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 AC023824.2-201ENST00000566185 400 ntBASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 AC073657.2-201ENST00000605661 303 ntBASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 AC004792.1-201ENST00000614523 137 ntBASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 AC011476.5-201ENST00000615594 130 ntBASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.02□□□□□ -1.77
RNF111Q6ZNA4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 RNU6-222P-201ENST00000362438 107 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 Y_RNA.270-201ENST00000364693 104 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 RNU6-72P-201ENST00000384285 79 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 Y_RNA.541-201ENST00000384640 113 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 AC098614.2-201ENST00000426040 255 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 AL590383.1-201ENST00000428602 75 ntBASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.01□□□□□ -1.77
RNF111Q6ZNA4 AC146944.2-203ENST00000502493 354 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms