Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MTCO2P34-201ENST00000421994 607 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 COTL1P1-201ENST00000422309 375 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 MTCYBP5-201ENST00000423752 1135 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 MTCO3P30-201ENST00000426425 670 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 MYL8P-204ENST00000431574 518 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 MTATP6P16-201ENST00000434543 526 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 MTCO2P3-201ENST00000442543 421 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AP001324.2-201ENST00000461163 319 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AC003982.1-202ENST00000469928 248 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AC018437.1-201ENST00000492214 406 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AC104806.1-201ENST00000508720 308 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AC114781.4-201ENST00000513707 639 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 RNU5B-3P-201ENST00000516601 115 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 MTCYBP20-201ENST00000524239 1129 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AP002963.1-201ENST00000530590 184 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 OR5AL2P-201ENST00000532185 920 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AC008521.1-201ENST00000587471 187 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AC024153.1-201ENST00000603103 365 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AC073648.5-201ENST00000603502 305 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AC244517.12-201ENST00000623581 663 ntBASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.51□□□□□ -2.01
NHLRC1Q6VVB1 AP006437.1-201ENST00000641440 3685 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 RNU1-100P-201ENST00000365255 165 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 Z98749.2-208ENST00000381646 500 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 SNORA75-201ENST00000384158 137 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 RNU6-456P-201ENST00000384493 107 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 MIR218-1-201ENST00000384999 110 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 MIR454-201ENST00000390180 115 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 RNU6-195P-201ENST00000411352 109 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 UBE2V1P10-201ENST00000414685 269 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AC097463.2-201ENST00000421074 142 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 SUMO1P4-201ENST00000429430 302 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 C8orf59P1-201ENST00000429930 303 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AL135938.1-201ENST00000443141 297 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 USP9YP29-201ENST00000445112 563 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AC104058.1-201ENST00000448028 297 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 CKS1BP2-201ENST00000497342 240 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AIG1P1-201ENST00000503376 148 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 ARL2BPP4-201ENST00000506854 471 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AC117522.3-201ENST00000507974 584 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AC091826.1-201ENST00000514065 313 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 SNORA31.6-201ENST00000516241 130 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 RNU6-720P-201ENST00000516363 108 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 RNU6-685P-201ENST00000517088 95 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AC010186.2-204ENST00000537668 439 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 HPRT1P3-201ENST00000539521 576 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AC009163.5-201ENST00000575421 637 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AC105245.1-201ENST00000581934 244 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 MIR3611-201ENST00000584484 83 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AL121992.2-201ENST00000606262 256 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 MIR6852-201ENST00000621699 66 ntBASIC2.5□□□□□ -2.01
NHLRC1Q6VVB1 CKAP2P1-201ENST00000555477 2049 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 HAUS6P2-201ENST00000433254 2404 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 OR56A5-201ENST00000340110 738 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 RNU6-517P-201ENST00000384362 110 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 Y_RNA.516-201ENST00000384541 124 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 RNU6-297P-201ENST00000384636 107 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 MIR10A-201ENST00000385043 110 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 RNU6-248P-201ENST00000410720 107 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 RNU2-63P-201ENST00000410792 194 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 BX295541.1-201ENST00000417774 250 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 MTND1P4-201ENST00000435196 415 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 AL022238.1-201ENST00000442557 355 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 AL121769.1-201ENST00000469473 401 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 AC112206.3-201ENST00000514578 389 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 RNA5SP503-201ENST00000517047 117 ntBASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.49□□□□□ -2.01
NHLRC1Q6VVB1 AC079600.2-201ENST00000550076 130 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms