Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 RNU1-73P-201ENST00000383971 164 ntBASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 RNU6-213P-201ENST00000384051 104 ntBASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 SNORA36A-201ENST00000384221 132 ntBASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 SNORA70.10-201ENST00000384515 134 ntBASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 MIR493-201ENST00000385254 89 ntBASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 RPL26P27-201ENST00000414397 437 ntBASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 RPL21P66-201ENST00000426566 466 ntBASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 MIR5571-201ENST00000577998 113 ntBASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 AC022441.3-201ENST00000605737 136 ntBASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 AC048347.1-201ENST00000624621 427 ntBASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
PRPF38BQ5VTL8 SRP72P2-201ENST00000344851 1979 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 AC092681.1-201ENST00000297369 291 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 RNU5F-3P-201ENST00000363767 117 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 RNU6-873P-201ENST00000363833 107 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 Y_RNA.217-201ENST00000364214 105 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 RN7SKP153-201ENST00000365026 316 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 RNU6-215P-201ENST00000365169 102 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 RNU1-100P-201ENST00000365255 165 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 SNORA2.3-201ENST00000383920 135 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 AC007969.2-201ENST00000441891 191 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 Y_RNA.641-201ENST00000459414 105 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 AL357075.2-201ENST00000614906 189 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 AC092593.1-201ENST00000515413 1815 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 ABCC13-202ENST00000463099 3842 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 AC104964.3-201ENST00000606115 2860 ntBASIC5.18□□□□□ -1.58
PRPF38BQ5VTL8 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 RNU4-80P-201ENST00000363200 141 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 RNU6-1141P-201ENST00000364520 107 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 RNU6-211P-201ENST00000384047 107 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 Y_RNA.568-201ENST00000384742 113 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 Y_RNA.580-201ENST00000391004 95 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 RNU5E-9P-201ENST00000411164 104 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 AL356095.1-201ENST00000417217 199 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 RNU6-625P-201ENST00000459412 107 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 HMGB3P3-201ENST00000510526 400 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 RNU1-6P-201ENST00000516290 144 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 RNA5SP54-201ENST00000516951 92 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 SCARNA20.4-201ENST00000516969 131 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 RN7SKP289-201ENST00000517244 295 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 MIR5692C2-201ENST00000577959 77 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 MIR6867-201ENST00000610636 67 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 AL359198.2-201ENST00000611836 194 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 MIR6133-201ENST00000617057 108 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 uc_338.7-201ENST00000621834 124 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 snoU18.1-201ENST00000629629 71 ntBASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF38BQ5VTL8 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 RNU6-778P-201ENST00000363269 103 ntBASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 RNU1-83P-201ENST00000363426 164 ntBASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 SNORD115-8-201ENST00000363856 82 ntBASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 SNORD115-38-201ENST00000365037 82 ntBASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 RNU6-449P-201ENST00000383914 107 ntBASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 AL035079.1-201ENST00000405210 287 ntBASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 AL162725.1-201ENST00000435405 301 ntBASIC5.16□□□□□ -1.58
PRPF38BQ5VTL8 LINC02210-201ENST00000444561 288 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms