Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL021997.1-201ENST00000605757 193 ntBASIC0.19□□□□□ -2.38
LRRK2Q5S007 AC027309.3-201ENST00000623419 351 ntBASIC0.19□□□□□ -2.38
LRRK2Q5S007 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.19□□□□□ -2.38
LRRK2Q5S007 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
LRRK2Q5S007 U3.8-201ENST00000363675 217 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 U3.29-201ENST00000391296 212 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 MTND5P8-201ENST00000449817 1083 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 SNRPGP6-201ENST00000451124 220 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.18□□□□□ -2.38
LRRK2Q5S007 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.18□□□□□ -2.38
LRRK2Q5S007 SCARNA8-201ENST00000515924 131 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 DUXAP1-201ENST00000556632 463 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.18□□□□□ -2.38
LRRK2Q5S007 AL355472.4-201ENST00000610233 626 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 CR848007.1-201ENST00000442354 1699 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 Z75746.1-201ENST00000440243 2080 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 SNORD114-31-201ENST00000363219 75 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 RNU6-1155P-201ENST00000363554 107 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 SNORD18A-201ENST00000363753 72 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 AL034374.1-201ENST00000406329 351 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.18□□□□□ -2.38
LRRK2Q5S007 OR51AB1P-201ENST00000429046 620 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.18□□□□□ -2.38
LRRK2Q5S007 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 AC015908.1-201ENST00000478739 476 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.18□□□□□ -2.38
LRRK2Q5S007 SNORA31.18-201ENST00000517043 134 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 AC136628.3-201ENST00000521868 290 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.18□□□□□ -2.38
LRRK2Q5S007 AL359212.1-201ENST00000556608 614 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 AC008121.1-201ENST00000603244 268 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 RNU4-5P-201ENST00000607255 135 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 AC011155.2-201ENST00000623202 216 ntBASIC0.18□□□□□ -2.38
LRRK2Q5S007 Y_RNA.67-201ENST00000362870 100 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 RNA5SP222-201ENST00000411039 105 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 ZNF863P-201ENST00000426746 417 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 AL096803.2-201ENST00000450032 677 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.17□□□□□ -2.38
LRRK2Q5S007 Y_RNA.711-201ENST00000516993 102 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 SCARNA11.3-201ENST00000517276 130 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 AC040174.2-201ENST00000602701 465 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 AC110792.4-201ENST00000609843 298 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.17□□□□□ -2.38
LRRK2Q5S007 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.17□□□□□ -2.38
LRRK2Q5S007 RNU6-338P-201ENST00000383888 105 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
LRRK2Q5S007 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.17□□□□□ -2.38
LRRK2Q5S007 AL590556.1-201ENST00000423231 483 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 AC093106.2-201ENST00000428212 385 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 MTCYBP34-201ENST00000439552 670 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 RNU6-420P-201ENST00000458780 107 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 AC022254.1-201ENST00000567857 235 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
LRRK2Q5S007 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.17□□□□□ -2.38
LRRK2Q5S007 MTND4P14-201ENST00000435799 1354 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
LRRK2Q5S007 U3.20-201ENST00000390909 217 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.16□□□□□ -2.38
LRRK2Q5S007 RPL7L1P10-201ENST00000427790 463 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.16□□□□□ -2.38
LRRK2Q5S007 AP003049.1-201ENST00000529418 457 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 AC025449.1-201ENST00000603896 529 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 AL021879.1-201ENST00000611756 288 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 AC022202.1-201ENST00000613515 211 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 AC008443.7-201ENST00000622195 246 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 MIR371B-201ENST00000638082 66 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 Y_RNA.352-201ENST00000365439 102 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 RNU6-26P-201ENST00000383985 107 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 RNU6-152P-201ENST00000384037 107 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 RPL37P10-201ENST00000412884 288 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.16□□□□□ -2.38
LRRK2Q5S007 AC092001.1-201ENST00000453012 261 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC0.16□□□□□ -2.38
LRRK2Q5S007 snoU13.28-201ENST00000459235 104 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.16□□□□□ -2.38
LRRK2Q5S007 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC0.16□□□□□ -2.38
LRRK2Q5S007 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.16□□□□□ -2.38
LRRK2Q5S007 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.16□□□□□ -2.38
LRRK2Q5S007 EIF1P4-201ENST00000572664 335 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 MIR3609-201ENST00000582661 80 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 AC139769.3-201ENST00000618383 175 ntBASIC0.16□□□□□ -2.38
LRRK2Q5S007 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
LRRK2Q5S007 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.15□□□□□ -2.39
LRRK2Q5S007 AL355615.1-201ENST00000406187 641 ntBASIC0.15□□□□□ -2.39
LRRK2Q5S007 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.15□□□□□ -2.39
LRRK2Q5S007 MTND1P16-201ENST00000465177 898 ntBASIC0.15□□□□□ -2.39
LRRK2Q5S007 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.15□□□□□ -2.39
LRRK2Q5S007 AC145146.1-201ENST00000496370 254 ntBASIC0.15□□□□□ -2.39
LRRK2Q5S007 SNORD116-28-201ENST00000516123 91 ntBASIC0.15□□□□□ -2.39
LRRK2Q5S007 AC012435.1-202ENST00000568772 240 ntBASIC0.15□□□□□ -2.39
LRRK2Q5S007 AC025588.4-201ENST00000615802 908 ntBASIC0.15□□□□□ -2.39
LRRK2Q5S007 MIR6864-201ENST00000617935 70 ntBASIC0.15□□□□□ -2.39
LRRK2Q5S007 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.15□□□□□ -2.39
LRRK2Q5S007 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
LRRK2Q5S007 RNU6-271P-201ENST00000363858 105 ntBASIC0.15□□□□□ -2.39
LRRK2Q5S007 MTCO2P8-201ENST00000412213 658 ntBASIC0.15□□□□□ -2.39
LRRK2Q5S007 AC023347.2-201ENST00000433994 462 ntBASIC0.15□□□□□ -2.39
LRRK2Q5S007 ARPC3P5-201ENST00000448802 534 ntBASIC0.15□□□□□ -2.39
LRRK2Q5S007 snoU13.7-201ENST00000459220 104 ntBASIC0.15□□□□□ -2.39
LRRK2Q5S007 RPL21P47-201ENST00000483696 477 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms