Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 FTLP6-201ENST00000355274 422 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 Y_RNA.33-201ENST00000362591 102 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 RNU6-434P-201ENST00000384376 107 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 RNU6-140P-201ENST00000384566 108 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 MIR301A-201ENST00000385261 86 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 UBA52P6-201ENST00000399822 382 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 RPL5P18-201ENST00000406671 891 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 MIR548F5-201ENST00000408421 86 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 Y_RNA.631-201ENST00000459607 101 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 RN7SKP83-201ENST00000516512 178 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 RNU6-928P-201ENST00000516876 104 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 IGKV2-26-201ENST00000518305 343 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 AC009902.1-201ENST00000519351 183 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 ZNF192P1-203ENST00000565888 810 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 MIR5680-201ENST00000577577 84 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 MIR1273C-201ENST00000578669 77 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 AL137843.1-201ENST00000605078 385 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 AC022418.1-201ENST00000624118 445 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 SRP72P2-201ENST00000344851 1979 ntBASIC3.62□□□□□ -1.83
SLC44A4Q53GD3 AC007496.3-201ENST00000624987 3443 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AL391417.1-201ENST00000404100 426 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 VN1R36P-201ENST00000414936 291 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AC245054.2-201ENST00000415639 319 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 ARL5AP1-201ENST00000418991 388 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 RPL21P109-201ENST00000422213 475 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AC092047.1-201ENST00000424997 240 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 Z82205.1-201ENST00000428456 297 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 SNRPEP9-201ENST00000436794 238 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 Y_RNA.639-201ENST00000458981 102 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 Y_RNA.635-201ENST00000459041 101 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 RNU7-167P-201ENST00000459160 62 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 RPS27P29-201ENST00000463110 252 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 RPL7P43-201ENST00000478876 753 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 RPS4XP22-201ENST00000480755 780 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AC092185.1-201ENST00000491371 97 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 MTCO1P29-201ENST00000496868 288 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AC104136.1-201ENST00000512969 394 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 TRAV37-201ENST00000553906 342 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 MIR4325-201ENST00000583049 90 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AC006504.6-201ENST00000590142 199 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AL080274.1-201ENST00000605565 220 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AC124303.1-201ENST00000605703 360 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AP003355.3-201ENST00000623465 114 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AL353743.1-202ENST00000431724 1695 ntBASIC3.61□□□□□ -1.83
SLC44A4Q53GD3 AC090740.1-201ENST00000623193 2262 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 RNU6-82P-201ENST00000363970 107 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 Y_RNA.399-201ENST00000383955 105 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 RNU6-1013P-201ENST00000384180 107 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 RNU6-1160P-201ENST00000384546 104 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 RNY4P36-201ENST00000391116 96 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 MTCYBP4-201ENST00000401524 249 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 MIR548K-201ENST00000408406 116 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 RNU2-68P-201ENST00000410878 191 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 AC006028.1-201ENST00000438379 402 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 AC008264.1-201ENST00000447612 367 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 MRPS31P2-201ENST00000451581 518 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 AC117503.1-201ENST00000472241 394 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 AL163540.1-201ENST00000485382 386 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 RN7SL504P-201ENST00000494496 287 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 TRBVA-201ENST00000498804 316 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 AC006445.2-201ENST00000510061 472 ntBASIC3.6□□□□□ -1.83
SLC44A4Q53GD3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms