Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.78□□□□□ -1.8
SF3B3Q15393 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SF3B3Q15393 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.78□□□□□ -1.8
SF3B3Q15393 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
SF3B3Q15393 AC004925.1-201ENST00000624256 2706 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 RNU6-1252P-201ENST00000363054 104 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 AP002088.1-201ENST00000382740 395 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 RNY4P36-201ENST00000391116 96 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 AC074085.1-201ENST00000413598 418 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.77□□□□□ -1.81
SF3B3Q15393 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.77□□□□□ -1.81
SF3B3Q15393 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.77□□□□□ -1.81
SF3B3Q15393 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.77□□□□□ -1.81
SF3B3Q15393 AC107399.1-201ENST00000451226 265 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.77□□□□□ -1.81
SF3B3Q15393 TRBVA-201ENST00000498804 316 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 RNU6-327P-201ENST00000516270 127 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 RNU6-273P-201ENST00000516937 96 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
SF3B3Q15393 ELOCP31-201ENST00000540463 467 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 AC018630.1-201ENST00000541376 925 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.77□□□□□ -1.81
SF3B3Q15393 MIR3171-201ENST00000584270 74 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 RPL12P50-201ENST00000603116 116 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 AC174048.1-201ENST00000603389 144 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 AP001836.1-201ENST00000604675 523 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 AC124303.1-201ENST00000605703 360 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.77□□□□□ -1.81
SF3B3Q15393 DUSP12P1-201ENST00000612874 516 ntBASIC3.77□□□□□ -1.81
SF3B3Q15393 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.77□□□□□ -1.81
SF3B3Q15393 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.77□□□□□ -1.81
SF3B3Q15393 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
SF3B3Q15393 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SF3B3Q15393 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SF3B3Q15393 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
SF3B3Q15393 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.77□□□□□ -1.81
SF3B3Q15393 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SF3B3Q15393 MIR369-201ENST00000362155 70 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 SNORA4.3-201ENST00000365564 137 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SF3B3Q15393 RNA5SP31-201ENST00000411144 127 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 BX682237.1-201ENST00000415016 335 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.76□□□□□ -1.81
SF3B3Q15393 RPS12P18-201ENST00000442381 270 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.76□□□□□ -1.81
SF3B3Q15393 AC027575.1-201ENST00000481064 460 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.76□□□□□ -1.81
SF3B3Q15393 MTND5P5-201ENST00000503764 376 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.76□□□□□ -1.81
SF3B3Q15393 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.76□□□□□ -1.81
SF3B3Q15393 AC091826.1-201ENST00000514065 313 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 RNA5SP356-201ENST00000515972 94 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 RNU6-1045P-201ENST00000516321 107 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 RNA5SP454-201ENST00000517231 127 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.76□□□□□ -1.81
SF3B3Q15393 APOOP3-201ENST00000536787 586 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 AC023043.2-201ENST00000589678 1026 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 SNRPGP17-201ENST00000603780 214 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.76□□□□□ -1.81
SF3B3Q15393 AC009570.1-201ENST00000609599 745 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 AC084781.2-201ENST00000615568 161 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
SF3B3Q15393 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.76□□□□□ -1.81
SF3B3Q15393 AL353748.2-201ENST00000622148 471 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 MIR4275-201ENST00000636486 87 ntBASIC3.76□□□□□ -1.81
SF3B3Q15393 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
SF3B3Q15393 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.76□□□□□ -1.81
SF3B3Q15393 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.76□□□□□ -1.81
SF3B3Q15393 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SF3B3Q15393 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.76□□□□□ -1.81
SF3B3Q15393 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.75□□□□□ -1.81
SF3B3Q15393 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.75□□□□□ -1.81
SF3B3Q15393 RNU6-738P-201ENST00000384531 106 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 RNU6-14P-201ENST00000384630 106 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 MIR184-201ENST00000384962 84 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 MIR559-201ENST00000385188 96 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 FABP5P13-201ENST00000452144 328 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 AC010401.1-201ENST00000463867 348 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 DYNLL1P5-201ENST00000467158 270 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 RPL23AP14-201ENST00000468281 468 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.75□□□□□ -1.81
SF3B3Q15393 VN1R104P-201ENST00000505115 1009 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 HIGD1AP13-201ENST00000509878 289 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 RNU6-390P-201ENST00000516259 103 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 RN7SKP60-201ENST00000516985 239 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 RN7SKP272-201ENST00000516988 232 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 SNORA31.22-201ENST00000517204 135 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 COPS8P3-201ENST00000526024 482 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.75□□□□□ -1.81
SF3B3Q15393 AC090115.3-201ENST00000553218 849 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 OR4H12P-201ENST00000556269 907 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 MTCO3P23-201ENST00000561363 289 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.75□□□□□ -1.81
SF3B3Q15393 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SF3B3Q15393 AL138889.2-201ENST00000603883 242 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 AC080078.3-201ENST00000605407 463 ntBASIC3.75□□□□□ -1.81
SF3B3Q15393 AL080274.1-201ENST00000605565 220 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms