Protein–RNA interactions for Protein: Q14994

NR1I3, Nuclear receptor subfamily 1 group I member 3, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3Q14994 MRPL49P2-201ENST00000521066 465 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.06□□□□□ -1.76
NR1I3Q14994 AC007458.1-201ENST00000542812 373 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 RRN3P3-201ENST00000549207 578 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 MIR3939-201ENST00000582614 106 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 AL161798.1-201ENST00000604630 131 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.06□□□□□ -1.76
NR1I3Q14994 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.06□□□□□ -1.76
NR1I3Q14994 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.06□□□□□ -1.76
NR1I3Q14994 MTND5P9-201ENST00000503854 1755 ntBASIC4.06□□□□□ -1.76
NR1I3Q14994 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
NR1I3Q14994 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.05□□□□□ -1.76
NR1I3Q14994 RNU1-35P-201ENST00000362782 153 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 RNU6-356P-201ENST00000384140 107 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 MIR301A-201ENST00000385261 86 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 Y_RNA.592-201ENST00000410274 109 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 AL158156.1-201ENST00000422509 473 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 PIGPP3-201ENST00000425307 415 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 MTCO1P39-201ENST00000426148 480 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 AC006989.1-201ENST00000427212 131 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 AC087588.1-201ENST00000462203 316 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 AC006463.2-201ENST00000473326 348 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 SNORA31.9-201ENST00000516429 84 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 RN7SKP40-201ENST00000517211 242 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 AC034114.1-201ENST00000520293 285 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.05□□□□□ -1.76
NR1I3Q14994 AC008011.1-201ENST00000545989 227 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 AC103996.1-201ENST00000555468 102 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.05□□□□□ -1.76
NR1I3Q14994 MIR5696-201ENST00000578474 85 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.05□□□□□ -1.76
NR1I3Q14994 MIR4425-201ENST00000580572 84 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 AC098479.1-201ENST00000609225 154 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 AC112484.5-201ENST00000624189 228 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.05□□□□□ -1.76
NR1I3Q14994 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
NR1I3Q14994 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.05□□□□□ -1.76
NR1I3Q14994 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
NR1I3Q14994 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NR1I3Q14994 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NR1I3Q14994 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
NR1I3Q14994 AL133412.1-201ENST00000380194 2992 ntBASIC4.05□□□□□ -1.76
NR1I3Q14994 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
NR1I3Q14994 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.04□□□□□ -1.76
NR1I3Q14994 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NR1I3Q14994 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
NR1I3Q14994 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.04□□□□□ -1.76
NR1I3Q14994 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NR1I3Q14994 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NR1I3Q14994 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.04□□□□□ -1.76
NR1I3Q14994 Y_RNA.183-201ENST00000363882 113 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 RNU6-395P-201ENST00000365662 106 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 RNU6-611P-201ENST00000384276 104 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 Y_RNA.478-201ENST00000384358 107 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 Y_RNA.539-201ENST00000384635 107 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 RPL21P65-201ENST00000406094 466 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 MIR548M-201ENST00000408260 86 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 RNU2-25P-201ENST00000411041 191 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 SNORD56-201ENST00000413522 71 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.04□□□□□ -1.76
NR1I3Q14994 EIF4EP2-201ENST00000422816 654 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 AC139712.2-201ENST00000424302 339 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 AL139109.1-201ENST00000455491 297 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.04□□□□□ -1.76
NR1I3Q14994 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.04□□□□□ -1.76
NR1I3Q14994 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.04□□□□□ -1.76
NR1I3Q14994 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.04□□□□□ -1.76
NR1I3Q14994 AP006245.1-201ENST00000522549 120 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.04□□□□□ -1.76
NR1I3Q14994 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.04□□□□□ -1.76
NR1I3Q14994 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.04□□□□□ -1.76
NR1I3Q14994 AL355877.2-201ENST00000603670 358 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 AC107294.1-201ENST00000609524 467 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 RNVU1-4-201ENST00000612985 164 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 AP001282.2-201ENST00000616149 309 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 AC099669.2-201ENST00000616549 437 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 AL360181.4-201ENST00000621752 134 ntBASIC4.04□□□□□ -1.76
NR1I3Q14994 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.04□□□□□ -1.76
NR1I3Q14994 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
NR1I3Q14994 AC015813.6-201ENST00000624409 5808 ntBASIC4.03□□□□□ -1.76
NR1I3Q14994 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NR1I3Q14994 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.03□□□□□ -1.76
NR1I3Q14994 AP001148.1-201ENST00000624124 2359 ntBASIC4.03□□□□□ -1.76
NR1I3Q14994 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NR1I3Q14994 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NR1I3Q14994 Y_RNA.84-201ENST00000363011 104 ntBASIC4.03□□□□□ -1.76
NR1I3Q14994 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
NR1I3Q14994 Y_RNA.416-201ENST00000384014 113 ntBASIC4.03□□□□□ -1.76
NR1I3Q14994 RNU6-629P-201ENST00000384061 103 ntBASIC4.03□□□□□ -1.76
NR1I3Q14994 Y_RNA.518-201ENST00000384552 113 ntBASIC4.03□□□□□ -1.76
NR1I3Q14994 MIR585-201ENST00000384887 94 ntBASIC4.03□□□□□ -1.76
NR1I3Q14994 MIR514A1-201ENST00000385133 98 ntBASIC4.03□□□□□ -1.76
NR1I3Q14994 RPS26P8-201ENST00000393490 348 ntBASIC4.03□□□□□ -1.76
NR1I3Q14994 SNORA3.3-201ENST00000408712 125 ntBASIC4.03□□□□□ -1.76
NR1I3Q14994 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.03□□□□□ -1.76
NR1I3Q14994 MTND3P9-201ENST00000429526 346 ntBASIC4.03□□□□□ -1.76
NR1I3Q14994 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.03□□□□□ -1.76
NR1I3Q14994 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.03□□□□□ -1.76
NR1I3Q14994 AC010618.1-201ENST00000469924 477 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms