Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.08□□□□□ -2.08
RAB40BQ12829 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.08□□□□□ -2.08
RAB40BQ12829 RN7SKP132-201ENST00000516001 208 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AC090572.1-201ENST00000519251 160 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AP001646.1-201ENST00000527936 915 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 RANP3-201ENST00000530970 276 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.08□□□□□ -2.08
RAB40BQ12829 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.08□□□□□ -2.08
RAB40BQ12829 AC012414.6-201ENST00000568241 401 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.08□□□□□ -2.08
RAB40BQ12829 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RAB40BQ12829 AC008521.1-201ENST00000587471 187 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.08□□□□□ -2.08
RAB40BQ12829 SEPT7P9-203ENST00000604116 343 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 Z94722.1-201ENST00000604328 474 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AL670379.4-201ENST00000605279 254 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AL121917.1-203ENST00000605534 577 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 OR2AS2P-201ENST00000606902 342 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.08□□□□□ -2.08
RAB40BQ12829 AC024581.2-201ENST00000619986 252 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AC138649.3-201ENST00000622154 254 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 AC244517.12-201ENST00000623581 663 ntBASIC2.08□□□□□ -2.08
RAB40BQ12829 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
RAB40BQ12829 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.08□□□□□ -2.08
RAB40BQ12829 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
RAB40BQ12829 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RAB40BQ12829 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.07□□□□□ -2.08
RAB40BQ12829 AC138393.1-203ENST00000327086 343 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RAB40BQ12829 U3.4-201ENST00000363352 213 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 SNORD14B-201ENST00000364533 90 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 RNU4-91P-201ENST00000364778 135 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 Y_RNA.510-201ENST00000384511 114 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 RNU6-297P-201ENST00000384636 107 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 MIR518C-201ENST00000384822 101 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 MIR578-201ENST00000384828 96 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 MIR10A-201ENST00000385043 110 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RAB40BQ12829 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RAB40BQ12829 RNU6-387P-201ENST00000411331 105 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 AL031779.1-201ENST00000415663 330 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 AL353621.1-201ENST00000418219 243 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.07□□□□□ -2.08
RAB40BQ12829 RPS3AP44-201ENST00000425466 790 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.07□□□□□ -2.08
RAB40BQ12829 RPL31P35-201ENST00000431058 377 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.07□□□□□ -2.08
RAB40BQ12829 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.07□□□□□ -2.08
RAB40BQ12829 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.07□□□□□ -2.08
RAB40BQ12829 NDUFB1P2-201ENST00000449477 176 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.07□□□□□ -2.08
RAB40BQ12829 snoU109.2-201ENST00000459316 135 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 MTCO2P6-201ENST00000463134 685 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 AC126389.1-201ENST00000477436 290 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.07□□□□□ -2.08
RAB40BQ12829 AC018437.1-201ENST00000492214 406 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 SNORA18.6-201ENST00000516792 115 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 RNU6-410P-201ENST00000517006 107 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 OR5AQ1P-201ENST00000527596 927 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RAB40BQ12829 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.07□□□□□ -2.08
RAB40BQ12829 MTND3P12-201ENST00000559068 328 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.07□□□□□ -2.08
RAB40BQ12829 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.07□□□□□ -2.08
RAB40BQ12829 AC098848.2-201ENST00000588023 330 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 AL138889.2-201ENST00000603883 242 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 MIR98-201ENST00000606724 119 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 AC005332.10-201ENST00000612725 619 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 AC010378.1-201ENST00000619270 362 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 MIR6766-201ENST00000622641 72 ntBASIC2.07□□□□□ -2.08
RAB40BQ12829 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RAB40BQ12829 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
RAB40BQ12829 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
RAB40BQ12829 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
RAB40BQ12829 OR5H15-201ENST00000383696 930 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 MIR34A-201ENST00000385130 110 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
RAB40BQ12829 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.06□□□□□ -2.08
RAB40BQ12829 NUP35P1-201ENST00000422734 947 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 AC003685.2-201ENST00000422795 395 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 WARS2P1-201ENST00000429678 537 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.06□□□□□ -2.08
RAB40BQ12829 ARL5AP4-201ENST00000430731 512 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.06□□□□□ -2.08
RAB40BQ12829 GPR143P-201ENST00000434155 205 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 AL353706.1-201ENST00000436728 494 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 AC079781.2-201ENST00000446424 169 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.06□□□□□ -2.08
RAB40BQ12829 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.06□□□□□ -2.08
RAB40BQ12829 MTCYBP1-201ENST00000454315 1119 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 MED28P2-201ENST00000475771 317 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 AC117522.2-201ENST00000510049 657 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.06□□□□□ -2.08
RAB40BQ12829 AC114781.4-201ENST00000513707 639 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 RNU5B-3P-201ENST00000516601 115 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.06□□□□□ -2.08
RAB40BQ12829 AC135279.1-201ENST00000543493 504 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 AC079598.5-201ENST00000547460 117 ntBASIC2.06□□□□□ -2.08
RAB40BQ12829 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms