Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.73□□□□□ -2.29
HIST1H1AQ02539 AC010409.1-201ENST00000487382 476 ntBASIC0.73□□□□□ -2.29
HIST1H1AQ02539 AC079140.2-201ENST00000506193 142 ntBASIC0.73□□□□□ -2.29
HIST1H1AQ02539 MTCYBP43-201ENST00000513621 740 ntBASIC0.73□□□□□ -2.29
HIST1H1AQ02539 AP006587.4-201ENST00000526053 529 ntBASIC0.73□□□□□ -2.29
HIST1H1AQ02539 CENPUP1-201ENST00000526649 1202 ntBASIC0.73□□□□□ -2.29
HIST1H1AQ02539 TRAV32-201ENST00000553993 340 ntBASIC0.73□□□□□ -2.29
HIST1H1AQ02539 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.73□□□□□ -2.29
HIST1H1AQ02539 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
HIST1H1AQ02539 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.72□□□□□ -2.29
HIST1H1AQ02539 SNORD56.4-201ENST00000363883 71 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 RNU6-1078P-201ENST00000364522 103 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 RNU6-26P-201ENST00000383985 107 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 RNU6-546P-201ENST00000383991 107 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 RNU6-796P-201ENST00000391086 107 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 POLR2J4-204ENST00000418424 324 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AC013410.2-201ENST00000422627 201 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AL592045.1-201ENST00000429867 352 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AL365400.1-201ENST00000431854 640 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 PGBD4P5-201ENST00000445958 426 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AL035666.1-201ENST00000446195 348 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 MTCYBP11-201ENST00000447254 1109 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AC114982.1-201ENST00000469402 321 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 COX6CP14-201ENST00000469580 174 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.72□□□□□ -2.29
HIST1H1AQ02539 SNORD116-28-201ENST00000516123 91 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.72□□□□□ -2.29
HIST1H1AQ02539 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.72□□□□□ -2.29
HIST1H1AQ02539 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.72□□□□□ -2.29
HIST1H1AQ02539 CLIC4P2-201ENST00000601934 717 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AC091057.3-201ENST00000602684 733 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AC013244.2-201ENST00000603396 103 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AL139344.1-201ENST00000605228 195 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AC009237.15-201ENST00000610252 501 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AL133445.2-201ENST00000611191 527 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 RMST_10.1-201ENST00000616309 154 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 MIR8063-201ENST00000621930 81 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 AC132825.7-201ENST00000638744 335 ntBASIC0.72□□□□□ -2.29
HIST1H1AQ02539 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
HIST1H1AQ02539 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
HIST1H1AQ02539 AL161781.1-201ENST00000354277 403 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 RNU6-492P-201ENST00000363035 104 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 RNU6-1167P-201ENST00000363227 94 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 MIR506-201ENST00000384998 124 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.71□□□□□ -2.3
HIST1H1AQ02539 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.71□□□□□ -2.3
HIST1H1AQ02539 TPTE2P1-204ENST00000435256 593 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 RPL31P3-201ENST00000458430 332 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 RPL7P43-201ENST00000478876 753 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.71□□□□□ -2.3
HIST1H1AQ02539 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.71□□□□□ -2.3
HIST1H1AQ02539 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.71□□□□□ -2.3
HIST1H1AQ02539 MTND5P13-201ENST00000513046 1079 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 SUB1P4-201ENST00000566062 339 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 AC233266.2-201ENST00000567067 528 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 AC080078.3-201ENST00000605407 463 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 AL583856.2-201ENST00000606298 543 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 AC034229.4-201ENST00000607861 441 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 AC096772.1-201ENST00000609146 564 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 MIR6134-201ENST00000617606 109 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 AC233981.2-201ENST00000611524 1614 ntBASIC0.71□□□□□ -2.3
HIST1H1AQ02539 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.7□□□□□ -2.3
HIST1H1AQ02539 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
HIST1H1AQ02539 Y_RNA.99-201ENST00000363138 105 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 RNU6-968P-201ENST00000384076 107 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 MIR146A-201ENST00000385201 99 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.7□□□□□ -2.3
HIST1H1AQ02539 BTF3L4P3-201ENST00000418879 476 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 EIF1P1-201ENST00000421436 341 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 RPL36AP53-201ENST00000432891 316 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 UBE2V2P3-201ENST00000433562 437 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 AC092473.1-201ENST00000441098 221 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 JTBP1-201ENST00000441314 247 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 RPS4XP11-201ENST00000446897 772 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
HIST1H1AQ02539 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.7□□□□□ -2.3
HIST1H1AQ02539 MTND1P9-201ENST00000453775 944 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 MTND2P6-201ENST00000455337 1030 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 AC116655.1-201ENST00000508324 901 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 AC112198.4-201ENST00000515450 351 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.7□□□□□ -2.3
HIST1H1AQ02539 AP003392.2-201ENST00000527269 208 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 AC022616.8-201ENST00000533569 253 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 MIR4661-201ENST00000582720 75 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 MIR4298-201ENST00000584380 73 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 AC099654.5-201ENST00000636479 350 ntBASIC0.7□□□□□ -2.3
HIST1H1AQ02539 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
HIST1H1AQ02539 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
HIST1H1AQ02539 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
HIST1H1AQ02539 RNU6-1280P-201ENST00000365211 107 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 MTCO2P5-201ENST00000422621 426 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 OR6C5P-201ENST00000452388 923 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.69□□□□□ -2.3
HIST1H1AQ02539 AC091860.1-201ENST00000505723 432 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 HMGN1P13-201ENST00000505795 138 ntBASIC0.69□□□□□ -2.3
HIST1H1AQ02539 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms