Protein–RNA interactions for Protein: Q01831

XPC, DNA repair protein complementing XP-C cells, humanhuman

Predicted RBP Predictions only

Length 940 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPCQ01831 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
XPCQ01831 Y_RNA.5-201ENST00000362334 102 ntBASIC4.82□□□□□ -1.64
XPCQ01831 RNU6-1115P-201ENST00000362490 106 ntBASIC4.82□□□□□ -1.64
XPCQ01831 MIR517A-201ENST00000385001 87 ntBASIC4.82□□□□□ -1.64
XPCQ01831 SNORA75.6-201ENST00000391318 127 ntBASIC4.82□□□□□ -1.64
XPCQ01831 AL031121.1-201ENST00000406553 254 ntBASIC4.82□□□□□ -1.64
XPCQ01831 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.82□□□□□ -1.64
XPCQ01831 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.82□□□□□ -1.64
XPCQ01831 Z82210.1-201ENST00000440037 231 ntBASIC4.82□□□□□ -1.64
XPCQ01831 NDUFB1P2-201ENST00000449477 176 ntBASIC4.82□□□□□ -1.64
XPCQ01831 AL583843.1-201ENST00000456070 346 ntBASIC4.82□□□□□ -1.64
XPCQ01831 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.82□□□□□ -1.64
XPCQ01831 RPL21P13-201ENST00000488305 481 ntBASIC4.82□□□□□ -1.64
XPCQ01831 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.82□□□□□ -1.64
XPCQ01831 AC136601.2-201ENST00000604356 474 ntBASIC4.82□□□□□ -1.64
XPCQ01831 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.82□□□□□ -1.64
XPCQ01831 AC011890.2-201ENST00000613393 294 ntBASIC4.82□□□□□ -1.64
XPCQ01831 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.82□□□□□ -1.64
XPCQ01831 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.82□□□□□ -1.64
XPCQ01831 AC048347.1-201ENST00000624621 427 ntBASIC4.82□□□□□ -1.64
XPCQ01831 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
XPCQ01831 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.81□□□□□ -1.64
XPCQ01831 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
XPCQ01831 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
XPCQ01831 RNU6-50P-201ENST00000362356 103 ntBASIC4.81□□□□□ -1.64
XPCQ01831 RNU6-1059P-201ENST00000363752 98 ntBASIC4.81□□□□□ -1.64
XPCQ01831 RNU6-1197P-201ENST00000391183 107 ntBASIC4.81□□□□□ -1.64
XPCQ01831 Y_RNA.623-201ENST00000411128 95 ntBASIC4.81□□□□□ -1.64
XPCQ01831 AC018437.1-201ENST00000492214 406 ntBASIC4.81□□□□□ -1.64
XPCQ01831 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.81□□□□□ -1.64
XPCQ01831 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.81□□□□□ -1.64
XPCQ01831 AC004805.2-201ENST00000605382 482 ntBASIC4.81□□□□□ -1.64
XPCQ01831 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
XPCQ01831 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.81□□□□□ -1.64
XPCQ01831 PLCE1P1-201ENST00000622094 305 ntBASIC4.81□□□□□ -1.64
XPCQ01831 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
XPCQ01831 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
XPCQ01831 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
XPCQ01831 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.81□□□□□ -1.64
XPCQ01831 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
XPCQ01831 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
XPCQ01831 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
XPCQ01831 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
XPCQ01831 MTND5P30-201ENST00000452896 1731 ntBASIC4.8□□□□□ -1.64
XPCQ01831 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
XPCQ01831 Y_RNA.2-201ENST00000362330 96 ntBASIC4.8□□□□□ -1.64
XPCQ01831 SNORD14B-201ENST00000364533 90 ntBASIC4.8□□□□□ -1.64
XPCQ01831 RNU6-639P-201ENST00000384074 107 ntBASIC4.8□□□□□ -1.64
XPCQ01831 RNU6-331P-201ENST00000384724 107 ntBASIC4.8□□□□□ -1.64
XPCQ01831 MIR325-201ENST00000385260 98 ntBASIC4.8□□□□□ -1.64
XPCQ01831 RNA5SP129-201ENST00000410276 118 ntBASIC4.8□□□□□ -1.64
XPCQ01831 RNU2-68P-201ENST00000410878 191 ntBASIC4.8□□□□□ -1.64
XPCQ01831 AL096701.2-201ENST00000416920 238 ntBASIC4.8□□□□□ -1.64
XPCQ01831 PGBD4P6-201ENST00000421501 610 ntBASIC4.8□□□□□ -1.64
XPCQ01831 USMG5P1-201ENST00000425964 177 ntBASIC4.8□□□□□ -1.64
XPCQ01831 AL035666.1-201ENST00000446195 348 ntBASIC4.8□□□□□ -1.64
XPCQ01831 PCMTD1P1-201ENST00000455560 355 ntBASIC4.8□□□□□ -1.64
XPCQ01831 RNA5SP468-201ENST00000516782 93 ntBASIC4.8□□□□□ -1.64
XPCQ01831 AC007938.3-201ENST00000604965 623 ntBASIC4.8□□□□□ -1.64
XPCQ01831 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
XPCQ01831 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.8□□□□□ -1.64
XPCQ01831 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
XPCQ01831 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
XPCQ01831 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
XPCQ01831 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
XPCQ01831 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
XPCQ01831 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
XPCQ01831 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
XPCQ01831 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.79□□□□□ -1.64
XPCQ01831 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.79□□□□□ -1.64
XPCQ01831 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.79□□□□□ -1.64
XPCQ01831 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-37P-201ENST00000362692 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-11P-201ENST00000364234 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-7-201ENST00000364784 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-8-201ENST00000365467 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-25P-201ENST00000383873 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-1-201ENST00000383898 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-48P-201ENST00000384161 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-36P-201ENST00000384172 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-4P-201ENST00000384205 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-5P-201ENST00000384238 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 Y_RNA.463-201ENST00000384271 102 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-3P-201ENST00000384314 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-16P-201ENST00000384385 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-15P-201ENST00000384534 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-2-201ENST00000384627 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-29P-201ENST00000384637 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-9-201ENST00000384776 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU6-33P-201ENST00000384793 107 ntBASIC4.79□□□□□ -1.64
XPCQ01831 SNORA40C-201ENST00000391285 128 ntBASIC4.79□□□□□ -1.64
XPCQ01831 AL357075.1-201ENST00000404107 726 ntBASIC4.79□□□□□ -1.64
XPCQ01831 U3.42-201ENST00000408746 214 ntBASIC4.79□□□□□ -1.64
XPCQ01831 RNU2-37P-201ENST00000410695 177 ntBASIC4.79□□□□□ -1.64
XPCQ01831 AL030996.1-201ENST00000411430 235 ntBASIC4.79□□□□□ -1.64
XPCQ01831 AC018865.2-201ENST00000423631 129 ntBASIC4.79□□□□□ -1.64
XPCQ01831 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
XPCQ01831 AL627311.1-201ENST00000431514 115 ntBASIC4.79□□□□□ -1.64
XPCQ01831 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
XPCQ01831 RPL21P104-201ENST00000464143 478 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms