Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AL355615.1-201ENST00000406187 641 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 AL590383.1-201ENST00000428602 75 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 RPL26P6-201ENST00000440913 438 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 DYNLT3P2-201ENST00000442517 295 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.6□□□□□ -2.31
SCN7AQ01118 AC006512.1-201ENST00000468816 291 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.6□□□□□ -2.31
SCN7AQ01118 AC124293.1-201ENST00000530034 493 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.6□□□□□ -2.31
SCN7AQ01118 AL031176.1-201ENST00000604554 466 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 AC016542.1-201ENST00000608259 493 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 AC091965.5-201ENST00000624785 342 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 Z99571.1-201ENST00000636677 394 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 AC017104.5-201ENST00000637647 639 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.59□□□□□ -2.31
SCN7AQ01118 RNU6-140P-201ENST00000384566 108 ntBASIC0.59□□□□□ -2.31
SCN7AQ01118 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
SCN7AQ01118 AC010385.1-201ENST00000412374 256 ntBASIC0.59□□□□□ -2.31
SCN7AQ01118 RAB11AP1-201ENST00000442978 646 ntBASIC0.59□□□□□ -2.31
SCN7AQ01118 AC068135.1-201ENST00000446164 246 ntBASIC0.59□□□□□ -2.31
SCN7AQ01118 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.59□□□□□ -2.31
SCN7AQ01118 AC093677.1-201ENST00000514414 678 ntBASIC0.59□□□□□ -2.31
SCN7AQ01118 RNA5SP337-201ENST00000517007 109 ntBASIC0.59□□□□□ -2.31
SCN7AQ01118 AP003066.2-201ENST00000529375 555 ntBASIC0.59□□□□□ -2.31
SCN7AQ01118 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.59□□□□□ -2.31
SCN7AQ01118 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.59□□□□□ -2.31
SCN7AQ01118 MIR4653-201ENST00000585107 83 ntBASIC0.59□□□□□ -2.31
SCN7AQ01118 AC011374.2-201ENST00000607135 526 ntBASIC0.59□□□□□ -2.31
SCN7AQ01118 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.59□□□□□ -2.31
SCN7AQ01118 RNU6-271P-201ENST00000363858 105 ntBASIC0.59□□□□□ -2.32
SCN7AQ01118 MIR518D-201ENST00000385014 87 ntBASIC0.59□□□□□ -2.32
SCN7AQ01118 AL606490.4-201ENST00000423117 127 ntBASIC0.59□□□□□ -2.32
SCN7AQ01118 snoU13.9-201ENST00000458927 103 ntBASIC0.59□□□□□ -2.32
SCN7AQ01118 RPL30P6-201ENST00000475925 342 ntBASIC0.59□□□□□ -2.32
SCN7AQ01118 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
SCN7AQ01118 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.59□□□□□ -2.32
SCN7AQ01118 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.59□□□□□ -2.32
SCN7AQ01118 BNIP3P23-201ENST00000599655 511 ntBASIC0.59□□□□□ -2.32
SCN7AQ01118 AL022067.1-201ENST00000602426 454 ntBASIC0.59□□□□□ -2.32
SCN7AQ01118 BX322635.1-201ENST00000605804 496 ntBASIC0.59□□□□□ -2.32
SCN7AQ01118 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.59□□□□□ -2.32
SCN7AQ01118 AC117490.2-201ENST00000610042 594 ntBASIC0.59□□□□□ -2.32
SCN7AQ01118 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.59□□□□□ -2.32
SCN7AQ01118 AC068787.1-201ENST00000623908 691 ntBASIC0.59□□□□□ -2.32
SCN7AQ01118 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.58□□□□□ -2.32
SCN7AQ01118 PIGPP2-201ENST00000411569 458 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 VN1R42P-201ENST00000424651 344 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 UBE2V2P3-201ENST00000433562 437 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.58□□□□□ -2.32
SCN7AQ01118 AC098831.1-201ENST00000440661 216 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 AL035666.1-201ENST00000446195 348 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 RPL26P9-201ENST00000457466 433 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 RNU6-775P-201ENST00000459318 96 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 HAR1A.1-201ENST00000459583 118 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 LARP1BP2-201ENST00000486594 519 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.58□□□□□ -2.32
SCN7AQ01118 AP003122.4-201ENST00000530980 758 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 AC005832.3-201ENST00000537929 631 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 LSM6P2-201ENST00000552208 177 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.58□□□□□ -2.32
SCN7AQ01118 AC005261.5-201ENST00000596280 355 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.58□□□□□ -2.32
SCN7AQ01118 MIR6130-201ENST00000619419 109 ntBASIC0.58□□□□□ -2.32
SCN7AQ01118 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
SCN7AQ01118 RNU6-486P-201ENST00000363116 107 ntBASIC0.57□□□□□ -2.32
SCN7AQ01118 RNU1-124P-201ENST00000363861 145 ntBASIC0.57□□□□□ -2.32
SCN7AQ01118 RNU6-968P-201ENST00000384076 107 ntBASIC0.57□□□□□ -2.32
SCN7AQ01118 SNORA51.6-201ENST00000384151 125 ntBASIC0.57□□□□□ -2.32
SCN7AQ01118 C1DP1-201ENST00000426049 402 ntBASIC0.57□□□□□ -2.32
SCN7AQ01118 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN7AQ01118 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN7AQ01118 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.57□□□□□ -2.32
SCN7AQ01118 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.57□□□□□ -2.32
SCN7AQ01118 AP003327.1-201ENST00000529684 127 ntBASIC0.57□□□□□ -2.32
SCN7AQ01118 7SK.7-201ENST00000603504 247 ntBASIC0.57□□□□□ -2.32
SCN7AQ01118 MIR8065-201ENST00000620577 100 ntBASIC0.57□□□□□ -2.32
SCN7AQ01118 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SCN7AQ01118 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
SCN7AQ01118 Y_RNA.294-201ENST00000364916 102 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 SNORD82-201ENST00000365530 70 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 FTH1P12-201ENST00000432137 551 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 USP9YP24-201ENST00000434374 697 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 AL135790.2-201ENST00000437701 267 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 Z82210.1-201ENST00000440037 231 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.56□□□□□ -2.32
SCN7AQ01118 RPL9P9-202ENST00000466501 579 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SCN7AQ01118 SNORA4.4-201ENST00000515921 135 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 SCARNA15.2-201ENST00000516409 127 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.56□□□□□ -2.32
SCN7AQ01118 AL022345.1-201ENST00000607292 135 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.56□□□□□ -2.32
SCN7AQ01118 RNU5A-1-201ENST00000362698 116 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 Y_RNA.280-201ENST00000364765 112 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 RNU6-444P-201ENST00000383988 108 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.56□□□□□ -2.32
SCN7AQ01118 AC073614.1-201ENST00000438690 650 ntBASIC0.56□□□□□ -2.32
SCN7AQ01118 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms