Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 SNORA48.5-201ENST00000391143 135 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 RNU6-607P-201ENST00000411283 108 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 AC017079.2-201ENST00000416102 485 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 USMG5P1-201ENST00000425964 177 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.03□□□□□ -1.76
HERVK_113P62684 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.03□□□□□ -1.76
HERVK_113P62684 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.03□□□□□ -1.76
HERVK_113P62684 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.03□□□□□ -1.76
HERVK_113P62684 SNORD5.1-201ENST00000458800 75 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.03□□□□□ -1.76
HERVK_113P62684 HMGB1P30-201ENST00000492455 606 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 AC022493.1-201ENST00000492984 337 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.03□□□□□ -1.76
HERVK_113P62684 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.03□□□□□ -1.76
HERVK_113P62684 PHBP14-201ENST00000512887 367 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 RNU6-470P-201ENST00000515954 104 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 RNU6-120P-201ENST00000516077 103 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 RNU1-103P-201ENST00000516502 125 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 RNU6-579P-201ENST00000516879 102 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.03□□□□□ -1.76
HERVK_113P62684 AC010653.1-201ENST00000571108 881 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 LRRC37A5P-203ENST00000580181 585 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 KLKP1-201ENST00000595979 403 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 AC011494.1-201ENST00000596454 237 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HERVK_113P62684 AL355810.1-201ENST00000614629 552 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 U7.8-201ENST00000619968 63 ntBASIC4.03□□□□□ -1.76
HERVK_113P62684 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HERVK_113P62684 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
HERVK_113P62684 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 SNORA7.2-201ENST00000364446 145 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 Y_RNA.364-201ENST00000365532 101 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 MRPL42P3-201ENST00000401492 326 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 RN7SKP111-201ENST00000410349 271 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 RNU6-1025P-201ENST00000410629 104 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 CYCSP33-201ENST00000414485 327 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 AL353621.1-201ENST00000418219 243 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 AC018865.2-201ENST00000423631 129 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 RPL27AP8-201ENST00000424277 446 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 MTCYBP10-201ENST00000424905 650 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 AL645568.3-201ENST00000433683 316 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.02□□□□□ -1.77
HERVK_113P62684 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.02□□□□□ -1.77
HERVK_113P62684 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.02□□□□□ -1.77
HERVK_113P62684 RPL12P25-201ENST00000455592 494 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 AC022493.2-201ENST00000506122 481 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 FTH1P9-201ENST00000513251 355 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 SNORA25.10-201ENST00000515926 124 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 RNU2-58P-201ENST00000516403 183 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 SCARNA15.2-201ENST00000516409 127 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 RNA5SP384-201ENST00000516615 116 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 RNU6-699P-201ENST00000517081 110 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.02□□□□□ -1.77
HERVK_113P62684 MIR3921-201ENST00000577308 85 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.02□□□□□ -1.77
HERVK_113P62684 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.02□□□□□ -1.77
HERVK_113P62684 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.02□□□□□ -1.77
HERVK_113P62684 MAPK10-373ENST00000641983 6772 ntBASIC4.02□□□□□ -1.77
HERVK_113P62684 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HERVK_113P62684 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
HERVK_113P62684 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.02□□□□□ -1.77
HERVK_113P62684 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HERVK_113P62684 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
HERVK_113P62684 OTUD4P1-201ENST00000237841 3067 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HERVK_113P62684 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HERVK_113P62684 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HERVK_113P62684 RNU6-395P-201ENST00000365662 106 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 RNU6-1032P-201ENST00000384100 107 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 RNU6-1105P-201ENST00000384774 107 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 RNU2-3P-201ENST00000410144 191 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 Y_RNA.605-201ENST00000410577 105 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.01□□□□□ -1.77
HERVK_113P62684 AL356867.1-201ENST00000429623 299 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.01□□□□□ -1.77
HERVK_113P62684 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.01□□□□□ -1.77
HERVK_113P62684 PCMTD1P1-201ENST00000455560 355 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.01□□□□□ -1.77
HERVK_113P62684 AL049873.1-201ENST00000480540 376 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 RN7SL504P-201ENST00000494496 287 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 RNU1-86P-201ENST00000516108 154 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 MIR892C-201ENST00000516410 77 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 RNU1-107P-201ENST00000516617 154 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 RNU6-1073P-201ENST00000517182 106 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.01□□□□□ -1.77
HERVK_113P62684 TRAV37-201ENST00000553906 342 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 MIR5680-201ENST00000577577 84 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 MIR4680-201ENST00000580906 66 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.01□□□□□ -1.77
HERVK_113P62684 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HERVK_113P62684 AC005183.1-201ENST00000603687 1979 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HERVK_113P62684 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HERVK_113P62684 ZNF807-201ENST00000328088 1707 ntBASIC4.01□□□□□ -1.77
HERVK_113P62684 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HERVK_113P62684 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HERVK_113P62684 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4□□□□□ -1.77
HERVK_113P62684 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms