Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 Y_RNA.615-201ENST00000410769 117 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 AC009161.1-201ENST00000417306 376 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 RPL7P10-201ENST00000417407 739 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.82□□□□□ -1.96
CLDN20P56880 AL627311.1-201ENST00000431514 115 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.82□□□□□ -1.96
CLDN20P56880 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.82□□□□□ -1.96
CLDN20P56880 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.82□□□□□ -1.96
CLDN20P56880 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.82□□□□□ -1.96
CLDN20P56880 AC128713.1-201ENST00000471495 306 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 AC011005.2-201ENST00000487324 359 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 AC018710.1-201ENST00000506509 158 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.82□□□□□ -1.96
CLDN20P56880 RN7SKP43-201ENST00000516173 320 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 Y_RNA.665-201ENST00000516177 98 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 MIR892C-201ENST00000516410 77 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 SNORD59.2-201ENST00000516873 68 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.82□□□□□ -1.96
CLDN20P56880 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.82□□□□□ -1.96
CLDN20P56880 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.82□□□□□ -1.96
CLDN20P56880 AC018638.8-201ENST00000588755 281 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.82□□□□□ -1.96
CLDN20P56880 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.82□□□□□ -1.96
CLDN20P56880 VN1R80P-201ENST00000597126 338 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 MTND4LP5-201ENST00000605152 292 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CLDN20P56880 AC103705.1-201ENST00000619013 241 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.82□□□□□ -1.96
CLDN20P56880 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.82□□□□□ -1.96
CLDN20P56880 AC009033.1-201ENST00000624279 431 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 AC100810.6-201ENST00000638068 285 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.82□□□□□ -1.96
CLDN20P56880 AC121333.1-201ENST00000567488 2709 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
CLDN20P56880 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLDN20P56880 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLDN20P56880 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLDN20P56880 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLDN20P56880 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.81□□□□□ -1.96
CLDN20P56880 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.81□□□□□ -1.96
CLDN20P56880 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CLDN20P56880 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLDN20P56880 Y_RNA.100-201ENST00000363141 102 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 Y_RNA.167-201ENST00000363735 109 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 SNORD14B-201ENST00000364533 90 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 SNORA14A-201ENST00000364773 135 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.81□□□□□ -1.96
CLDN20P56880 AL592148.1-201ENST00000413568 445 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.81□□□□□ -1.96
CLDN20P56880 CYCSP33-201ENST00000414485 327 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 RPLP0P7-201ENST00000416050 667 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 MTND4LP11-201ENST00000422184 280 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.81□□□□□ -1.96
CLDN20P56880 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.81□□□□□ -1.96
CLDN20P56880 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.81□□□□□ -1.96
CLDN20P56880 RPL21P40-201ENST00000428586 483 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 CYCSP32-201ENST00000440548 321 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 AL590639.1-201ENST00000456484 337 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 AL031183.1-201ENST00000457667 207 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 RNU7-23P-201ENST00000459465 62 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 AC007547.1-201ENST00000462177 490 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.81□□□□□ -1.96
CLDN20P56880 AP000852.1-201ENST00000472460 573 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 AP004217.1-201ENST00000480579 346 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 RPS27AP10-201ENST00000496103 208 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 AC114786.4-201ENST00000508771 728 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 RNU1-86P-201ENST00000516108 154 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 RNU1-107P-201ENST00000516617 154 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 RNU6-1183P-201ENST00000517054 60 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLDN20P56880 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.81□□□□□ -1.96
CLDN20P56880 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.81□□□□□ -1.96
CLDN20P56880 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.81□□□□□ -1.96
CLDN20P56880 AL133393.1-201ENST00000603277 287 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.81□□□□□ -1.96
CLDN20P56880 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.81□□□□□ -1.96
CLDN20P56880 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CLDN20P56880 AC090617.10-201ENST00000624308 134 ntBASIC2.81□□□□□ -1.96
CLDN20P56880 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.81□□□□□ -1.96
CLDN20P56880 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CLDN20P56880 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLDN20P56880 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.8□□□□□ -1.96
CLDN20P56880 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CLDN20P56880 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CLDN20P56880 Y_RNA.72-201ENST00000362894 103 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 Y_RNA.86-201ENST00000363020 111 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 RNU6-1303P-201ENST00000364841 107 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 RNU6-384P-201ENST00000364900 104 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 Y_RNA.373-201ENST00000365600 103 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.8□□□□□ -1.96
CLDN20P56880 SNORD15B-201ENST00000384714 146 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 MIR483-201ENST00000385070 76 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 SNORD67-201ENST00000390833 111 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 SAR1AP2-201ENST00000392696 594 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 AL356057.2-201ENST00000403318 432 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 AL162578.1-201ENST00000406202 378 ntBASIC2.8□□□□□ -1.96
CLDN20P56880 RPL5P18-201ENST00000406671 891 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms