Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 BPY2DP-201ENST00000422208 265 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 AL358453.1-201ENST00000422522 250 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.81□□□□□ -1.8
GFRA1P56159 CYCSP32-201ENST00000440548 321 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.81□□□□□ -1.8
GFRA1P56159 FCF1P4-201ENST00000448326 183 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 AL353705.4-201ENST00000449661 238 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.81□□□□□ -1.8
GFRA1P56159 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.81□□□□□ -1.8
GFRA1P56159 RNA5SP246-201ENST00000458909 119 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.81□□□□□ -1.8
GFRA1P56159 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
GFRA1P56159 RPS26P21-201ENST00000475397 348 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 RPL32P34-201ENST00000486380 400 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.81□□□□□ -1.8
GFRA1P56159 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.81□□□□□ -1.8
GFRA1P56159 RNU6-397P-201ENST00000516226 104 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 Y_RNA.668-201ENST00000516233 93 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 RNY3P15-201ENST00000516297 97 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 RN7SKP21-201ENST00000516503 220 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 MIR2355-201ENST00000517199 87 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 AC109329.1-201ENST00000518744 317 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 AC034114.1-201ENST00000520293 285 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 TOMM20P2-201ENST00000540082 421 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.81□□□□□ -1.8
GFRA1P56159 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.81□□□□□ -1.8
GFRA1P56159 RN7SL600P-201ENST00000581811 299 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 AL356157.2-201ENST00000605122 111 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 AC107871.2-201ENST00000612894 502 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 SCARNA4-201ENST00000629045 128 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
GFRA1P56159 Z75746.1-201ENST00000440243 2080 ntBASIC3.81□□□□□ -1.8
GFRA1P56159 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.81□□□□□ -1.8
GFRA1P56159 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
GFRA1P56159 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
GFRA1P56159 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
GFRA1P56159 AC002546.1-201ENST00000588041 2504 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.8□□□□□ -1.8
GFRA1P56159 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
GFRA1P56159 Y_RNA.27-201ENST00000362540 103 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 RNU1-140P-201ENST00000365040 165 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 RNU6-1318P-201ENST00000365389 103 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 RNU6-1286P-201ENST00000383871 107 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 RNU6-142P-201ENST00000384019 107 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 MIR708-201ENST00000390708 88 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 MIR1179-201ENST00000408703 91 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 AC009237.10-201ENST00000414112 510 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.8□□□□□ -1.8
GFRA1P56159 PCNPP5-201ENST00000452246 481 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 RPS29P19-201ENST00000479709 171 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 AC097462.2-201ENST00000504623 481 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 RNU6-581P-201ENST00000516214 105 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.8□□□□□ -1.8
GFRA1P56159 AC021739.1-201ENST00000559631 174 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.8□□□□□ -1.8
GFRA1P56159 AC090517.1-201ENST00000569307 266 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.8□□□□□ -1.8
GFRA1P56159 HSPE1P7-201ENST00000604681 321 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 AL591034.3-201ENST00000605511 685 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 AC062037.2-201ENST00000610137 73 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.8□□□□□ -1.8
GFRA1P56159 MIR3199-2-201ENST00000636243 86 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 U6.104-201ENST00000637979 90 ntBASIC3.8□□□□□ -1.8
GFRA1P56159 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
GFRA1P56159 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
GFRA1P56159 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
GFRA1P56159 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.8□□□□□ -1.8
GFRA1P56159 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.8□□□□□ -1.8
GFRA1P56159 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
GFRA1P56159 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.79□□□□□ -1.8
GFRA1P56159 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
GFRA1P56159 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
GFRA1P56159 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GFRA1P56159 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.79□□□□□ -1.8
GFRA1P56159 OR56A5-201ENST00000340110 738 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 Y_RNA.214-201ENST00000364201 112 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 Y_RNA.288-201ENST00000364854 92 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 Y_RNA.461-201ENST00000384263 103 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 RNA5SP372-201ENST00000390836 115 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 RNA5SP317-201ENST00000410176 116 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 RNA5SP311-201ENST00000411290 116 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.79□□□□□ -1.8
GFRA1P56159 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.79□□□□□ -1.8
GFRA1P56159 ELOCP20-201ENST00000422460 345 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
GFRA1P56159 RPL21P40-201ENST00000428586 483 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.79□□□□□ -1.8
GFRA1P56159 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.79□□□□□ -1.8
GFRA1P56159 snoU13.28-201ENST00000459235 104 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 TOMM22P6-201ENST00000465035 409 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 MED28P2-201ENST00000475771 317 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 RN7SL283P-201ENST00000489055 303 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 ANXA2P1-201ENST00000505539 926 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.79□□□□□ -1.8
GFRA1P56159 RNA5SP315-201ENST00000516340 116 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 RN7SKP272-201ENST00000516988 232 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 RNA5SP312-201ENST00000517068 116 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 AC100770.1-201ENST00000532310 322 ntBASIC3.79□□□□□ -1.8
GFRA1P56159 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
GFRA1P56159 MRPS36P4-201ENST00000534436 298 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms