Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ZNF519P1-201ENST00000449011 1626 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC002546.1-201ENST00000588041 2504 ntBASIC2.99□□□□□ -1.93
CDH12P55289 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
CDH12P55289 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDH12P55289 MTND5P27-201ENST00000428871 1720 ntBASIC2.99□□□□□ -1.93
CDH12P55289 AC022336.2-201ENST00000568966 2538 ntBASIC2.98□□□□□ -1.93
CDH12P55289 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CDH12P55289 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.98□□□□□ -1.93
CDH12P55289 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
CDH12P55289 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDH12P55289 Y_RNA.67-201ENST00000362870 100 ntBASIC2.98□□□□□ -1.93
CDH12P55289 RNU6-778P-201ENST00000363269 103 ntBASIC2.98□□□□□ -1.93
CDH12P55289 RNU6-884P-201ENST00000363889 107 ntBASIC2.98□□□□□ -1.93
CDH12P55289 AL356967.1-201ENST00000406305 431 ntBASIC2.98□□□□□ -1.93
CDH12P55289 RNU4-14P-201ENST00000410858 122 ntBASIC2.98□□□□□ -1.93
CDH12P55289 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.98□□□□□ -1.93
CDH12P55289 AC245054.2-201ENST00000415639 319 ntBASIC2.98□□□□□ -1.93
CDH12P55289 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.98□□□□□ -1.93
CDH12P55289 PGBD4P6-201ENST00000421501 610 ntBASIC2.98□□□□□ -1.93
CDH12P55289 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.98□□□□□ -1.93
CDH12P55289 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.98□□□□□ -1.93
CDH12P55289 AL590632.1-201ENST00000424289 371 ntBASIC2.98□□□□□ -1.93
CDH12P55289 MTND4P28-201ENST00000426217 387 ntBASIC2.98□□□□□ -1.93
CDH12P55289 AL627311.1-201ENST00000431514 115 ntBASIC2.98□□□□□ -1.93
CDH12P55289 HMGN2P31-201ENST00000432430 273 ntBASIC2.98□□□□□ -1.93
CDH12P55289 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.98□□□□□ -1.93
CDH12P55289 GOT2P5-201ENST00000433995 546 ntBASIC2.98□□□□□ -1.93
CDH12P55289 RPS3AP52-201ENST00000435639 297 ntBASIC2.98□□□□□ -1.93
CDH12P55289 AL359672.1-201ENST00000442302 409 ntBASIC2.98□□□□□ -1.93
CDH12P55289 AL078601.1-201ENST00000444542 271 ntBASIC2.98□□□□□ -1.93
CDH12P55289 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.98□□□□□ -1.93
CDH12P55289 MTND1P17-201ENST00000448961 204 ntBASIC2.98□□□□□ -1.93
CDH12P55289 RNU7-138P-201ENST00000459479 64 ntBASIC2.98□□□□□ -1.93
CDH12P55289 RN7SL75P-201ENST00000461926 281 ntBASIC2.98□□□□□ -1.93
CDH12P55289 MTND5P5-201ENST00000503764 376 ntBASIC2.98□□□□□ -1.93
CDH12P55289 RNU1-103P-201ENST00000516502 125 ntBASIC2.98□□□□□ -1.93
CDH12P55289 AC087854.1-201ENST00000519706 414 ntBASIC2.98□□□□□ -1.93
CDH12P55289 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.98□□□□□ -1.93
CDH12P55289 AC007458.1-201ENST00000542812 373 ntBASIC2.98□□□□□ -1.93
CDH12P55289 MIR4790-201ENST00000577799 79 ntBASIC2.98□□□□□ -1.93
CDH12P55289 MIR4276-201ENST00000584832 70 ntBASIC2.98□□□□□ -1.93
CDH12P55289 AC245389.1-201ENST00000605141 529 ntBASIC2.98□□□□□ -1.93
CDH12P55289 AC008962.1-201ENST00000605729 304 ntBASIC2.98□□□□□ -1.93
CDH12P55289 SNORA51-201ENST00000606420 132 ntBASIC2.98□□□□□ -1.93
CDH12P55289 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.98□□□□□ -1.93
CDH12P55289 AL355365.1-201ENST00000616480 294 ntBASIC2.98□□□□□ -1.93
CDH12P55289 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.98□□□□□ -1.93
CDH12P55289 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.98□□□□□ -1.93
CDH12P55289 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.98□□□□□ -1.93
CDH12P55289 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDH12P55289 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.98□□□□□ -1.93
CDH12P55289 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.98□□□□□ -1.93
CDH12P55289 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.98□□□□□ -1.93
CDH12P55289 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.98□□□□□ -1.93
CDH12P55289 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDH12P55289 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CDH12P55289 RNU6-562P-201ENST00000362731 107 ntBASIC2.97□□□□□ -1.93
CDH12P55289 Y_RNA.126-201ENST00000363382 111 ntBASIC2.97□□□□□ -1.93
CDH12P55289 RNA5SP50-201ENST00000363731 107 ntBASIC2.97□□□□□ -1.93
CDH12P55289 Z98749.2-208ENST00000381646 500 ntBASIC2.97□□□□□ -1.93
CDH12P55289 RNU6-128P-201ENST00000383976 107 ntBASIC2.97□□□□□ -1.93
CDH12P55289 SNORA1.3-201ENST00000384676 136 ntBASIC2.97□□□□□ -1.93
CDH12P55289 SNORA46-201ENST00000384762 135 ntBASIC2.97□□□□□ -1.93
CDH12P55289 MIR10A-201ENST00000385043 110 ntBASIC2.97□□□□□ -1.93
CDH12P55289 SNORD73A-201ENST00000386062 65 ntBASIC2.97□□□□□ -1.93
CDH12P55289 SNORA48.8-201ENST00000391324 134 ntBASIC2.97□□□□□ -1.93
CDH12P55289 AC099548.1-201ENST00000421443 426 ntBASIC2.97□□□□□ -1.93
CDH12P55289 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.97□□□□□ -1.93
CDH12P55289 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.97□□□□□ -1.93
CDH12P55289 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.97□□□□□ -1.93
CDH12P55289 AL590664.1-201ENST00000448065 339 ntBASIC2.97□□□□□ -1.93
CDH12P55289 SSXP4-201ENST00000451349 245 ntBASIC2.97□□□□□ -1.93
CDH12P55289 UQCRHP3-201ENST00000451503 251 ntBASIC2.97□□□□□ -1.93
CDH12P55289 AC079140.5-201ENST00000507882 310 ntBASIC2.97□□□□□ -1.93
CDH12P55289 AC069113.1-201ENST00000517763 267 ntBASIC2.97□□□□□ -1.93
CDH12P55289 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.97□□□□□ -1.93
CDH12P55289 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.97□□□□□ -1.93
CDH12P55289 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.97□□□□□ -1.93
CDH12P55289 HIGD1AP1-201ENST00000550979 275 ntBASIC2.97□□□□□ -1.93
CDH12P55289 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.97□□□□□ -1.93
CDH12P55289 CYCSP39-201ENST00000565821 309 ntBASIC2.97□□□□□ -1.93
CDH12P55289 MIR3609-201ENST00000582661 80 ntBASIC2.97□□□□□ -1.93
CDH12P55289 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.97□□□□□ -1.93
CDH12P55289 AC113139.1-201ENST00000605049 239 ntBASIC2.97□□□□□ -1.93
CDH12P55289 AC016727.1-205ENST00000605437 569 ntBASIC2.97□□□□□ -1.93
CDH12P55289 U3.45-201ENST00000607547 219 ntBASIC2.97□□□□□ -1.93
CDH12P55289 AL157817.1-201ENST00000614264 790 ntBASIC2.97□□□□□ -1.93
CDH12P55289 AC002076.2-201ENST00000617362 122 ntBASIC2.97□□□□□ -1.93
CDH12P55289 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.97□□□□□ -1.93
CDH12P55289 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.97□□□□□ -1.93
CDH12P55289 U6.99-201ENST00000637524 83 ntBASIC2.97□□□□□ -1.93
CDH12P55289 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CDH12P55289 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.97□□□□□ -1.93
CDH12P55289 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CDH12P55289 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CDH12P55289 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
CDH12P55289 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDH12P55289 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CDH12P55289 MIR490-201ENST00000384865 128 ntBASIC2.96□□□□□ -1.94
CDH12P55289 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms